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PLM3-1_170_b1_sep16_scaffold_1173

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_1173_1
R_Acidobacteria_68_18, Acidobacteria, Bacteria

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1..771
DNA (771bp) protein (257aa)
pbpG; PbpG; K07262 D-alanyl-D-alanine endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-] bin=CNBR_ACIDO species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
D-alanyl-D-alanine carboxypeptidase family protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM3-1_170_b1_sep16_scaffold_1173_2
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(781..1695)
DNA (915bp) protein (305aa)
Formate dehydrogenase accessory protein Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M623_GEODF
formate dehydrogenase accessory protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM3-1_170_b1_sep16_scaffold_1173_3
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

1844..3289
DNA (1446bp) protein (482aa)
glycogen/starch synthase (EC:2.4.1.21)
glycogen synthase bin=CNBR_ACIDO species=Myxococcus stipitatus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM3-1_170_b1_sep16_scaffold_1173_4
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

3289..3621
DNA (333bp) protein (111aa)
thioredoxin; K03671 thioredoxin 1 bin=CNBR_ACIDO species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
thioredoxin
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM3-1_170_b1_sep16_scaffold_1173_5
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

3618..4580
DNA (963bp) protein (321aa)
trxB; thioredoxin-disulfide reductase (EC:1.8.1.9); K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] bin=CNBR_ACIDO species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
trxB; thioredoxin reductase, FAD/NAD(P)-binding (EC:1.8.1.9)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3-1_170_b1_sep16_scaffold_1173_6
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

4590..4949
DNA (360bp) protein (120aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM3-1_170_b1_sep16_scaffold_1173_7
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(4962..6569)
DNA (1608bp) protein (536aa)
Acetyl-CoA carboxylase carboxyltransferase Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I9C6_CALAS
accB; acetyl-CoA carboxylase carboxyltransferase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM3-1_170_b1_sep16_scaffold_1173_8
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

6708..8891
DNA (2184bp) protein (728aa)
Putative uncharacterized protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01QH9_SOLUE
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3-1_170_b1_sep16_scaffold_1173_9
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

8919..9269
DNA (351bp) protein (117aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM3-1_170_b1_sep16_scaffold_1173_10
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(9352..10872)
DNA (1521bp) protein (507aa)
Di-/tripeptide transporter Tax=Cystobacter fuscus DSM 2262 RepID=S9NZ63_9DELT
amino acid/peptide transporter
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM3-1_170_b1_sep16_scaffold_1173_11
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

11051..12181
DNA (1131bp) protein (377aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003601526
cytochrome c, class I
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM3-1_170_b1_sep16_scaffold_1173_12
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

12181..13869
DNA (1689bp) protein (563aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000365AE44
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM3-1_170_b1_sep16_scaffold_1173_13
R_Elusimicrobia_54_10, Elusimicrobia, Bacteria

Not on your lists

comp(13916..14407)
DNA (492bp) protein (164aa)
Putative uncharacterized protein bin=GWD2_Nitrospirae-related_57_8 species=Hydrogenivirga sp. 128-5-R1-1 genus=Hydrogenivirga taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_54_10_curated
PLM3-1_170_b1_sep16_scaffold_1173_14
unknown

Not on your lists

comp(14410..14835)
DNA (426bp) protein (142aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_1173_15
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(14867..15052)
DNA (186bp) protein (62aa)
Serine/threonine protein kinase Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01RF6_SOLUE
serine/threonine protein kinase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
Displaying 15 items

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