ggKbase home page

PLM3-1_170_b1_sep16_scaffold_1210

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_1210_1
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

2..271
DNA (270bp) protein (90aa)
Glutamate synthase [NADPH] large chain (NADPH-GOGAT) bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
gltB; ferredoxin-dependent glutamate synthase large subunit
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM3-1_170_b1_sep16_scaffold_1210_2
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

466..1914
DNA (1449bp) protein (483aa)
gltD; glutamate synthase [NADPH] small chain (EC:1.4.1.13)
Glutamate synthase [NADPH] small chain, (NADPH-GOGAT) bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM3-1_170_b1_sep16_scaffold_1210_3
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

2051..2680
DNA (630bp) protein (210aa)
Putative uncharacterized protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01NS1_SOLUE
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM3-1_170_b1_sep16_scaffold_1210_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2848..4104)
DNA (1257bp) protein (419aa)
hypothetical protein Tax=Singularimonas variicoloris RepID=UPI00038227BB
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3-1_170_b1_sep16_scaffold_1210_5
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

4387..6120
DNA (1734bp) protein (578aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_1210_6
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

6165..8444
DNA (2280bp) protein (760aa)
hypothetical protein Tax=unclassified Aminicenantes RepID=UPI0003614EE6
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM3-1_170_b1_sep16_scaffold_1210_7
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(8455..9978)
DNA (1524bp) protein (508aa)
hypothetical protein Tax=Aminicenantes bacterium SCGC AAA255-E10 RepID=UPI000369ED1A
peptidase dimerization
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM3-1_170_b1_sep16_scaffold_1210_8
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

10134..10622
DNA (489bp) protein (163aa)
Small chain CO dehydrogenase Tax=uncultured bacterium RepID=Q84CX4_9BACT
[2Fe-2S] binding domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
PLM3-1_170_b1_sep16_scaffold_1210_9
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

10626..12989
DNA (2364bp) protein (788aa)
Xanthine dehydrogenase Tax=uncultured Acidobacteria bacterium RepID=H5SFU3_9BACT
oxidoreductase, large chain
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
PLM3-1_170_b1_sep16_scaffold_1210_10
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

12986..13666
DNA (681bp) protein (227aa)
carbon-monoxide dehydrogenase (acceptor) (EC:1.2.99.2)
Molybdopterin dehydrogenase FAD-binding protein Tax=uncultured prokaryote RepID=H5SI32_9ZZZZ
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
Displaying 10 items

View Taxonomy