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PLM3-1_170_b1_sep16_scaffold_1352

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_1352_1
unknown

Not on your lists

comp(2..82)
DNA (81bp) protein (27aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_1352_2
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

244..564
DNA (321bp) protein (107aa)
phosphoribosyl-AMP cyclohydrolase; K11755 phosphoribosyl-ATP pyrophosphohydrolase / phosphoribosyl-AMP cyclohydrolase [EC:3.6.1.31 3.5.4.19] bin=CNBR_ACIDO species=Acidobacterium capsulatum genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
phosphoribosyl-AMP cyclohydrolase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM3-1_170_b1_sep16_scaffold_1352_3
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

566..1453
DNA (888bp) protein (296aa)
hisG; ATP phosphoribosyltransferase (EC:2.4.2.17); K00765 ATP phosphoribosyltransferase [EC:2.4.2.17] bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hisG; ATP phosphoribosyltransferase (EC:2.4.2.17)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM3-1_170_b1_sep16_scaffold_1352_4
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

1469..2713
DNA (1245bp) protein (415aa)
histidinol dehydrogenase (EC:1.1.1.23)
histidinol dehydrogenase bin=CNBR_ACIDO species=Terriglobus roseus genus=Terriglobus taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM3-1_170_b1_sep16_scaffold_1352_5
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

2710..3762
DNA (1053bp) protein (351aa)
Histidinol-phosphate aminotransferase Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IKB5_KORVE
histidinol phosphate aminotransferase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_1352_6
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

3747..4334
DNA (588bp) protein (196aa)
imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19); K01693 imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] bin=CNBR_ACIDO species=unknown genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hisB; imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM3-1_170_b1_sep16_scaffold_1352_7
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

4389..5012
DNA (624bp) protein (208aa)
imidazole glycerol phosphate synthase subunit hisH; K02501 glutamine amidotransferase [EC:2.4.2.-] bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
imidazole glycerol phosphate synthase, glutamine amidotransferase subunit
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_1352_8
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

5086..5841
DNA (756bp) protein (252aa)
imidazole glycerol phosphate synthase subunit HisF; K02500 cyclase [EC:4.1.3.-] bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hisF; imidazole glycerol phosphate synthase subunit HisF
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_1352_9
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

5870..6544
DNA (675bp) protein (225aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; K01814 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] bin=CNBR_ACIDO species=Granulicella mallensis genus=Granulicella taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_1352_10
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

6659..7804
DNA (1146bp) protein (382aa)
ATPase (AAA+ superfamily) bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ATPase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_1352_11
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

7888..8556
DNA (669bp) protein (223aa)
Uncharacterized protein Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2U441_9DELT
major facilitator family transporter
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM3-1_170_b1_sep16_scaffold_1352_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

8585..8890
DNA (306bp) protein (102aa)
MFS transporter Tax=Virgibacillus halodenitrificans RepID=UPI0002F987F8
Autophagy-related protein 22-like protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM3-1_170_b1_sep16_scaffold_1352_13
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

8962..9948
DNA (987bp) protein (329aa)
Uncharacterized protein Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SMR4_THEM7
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3-1_170_b1_sep16_scaffold_1352_14
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(9957..10340)
DNA (384bp) protein (128aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
PLM3-1_170_b1_sep16_scaffold_1352_15
RLO_PLX_64_10, Bacteria

Not on your lists

comp(10597..11862)
DNA (1266bp) protein (422aa)
Tetratricopeptide TPR_2 repeat protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01WG2_SOLUE
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM3-1_170_b1_sep16_scaffold_1352_16
Streptomyces sp. MUSC164, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11904..12836)
DNA (933bp) protein (311aa)
hypothetical protein Tax=Streptomyces rapamycinicus RepID=UPI0003831387
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KKA40882.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. MUSC164.;"
PLM3-1_170_b1_sep16_scaffold_1352_17
Amycolatopsis japonica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12942..13172)
DNA (231bp) protein (77aa)
hypothetical protein Tax=Streptomyces sp. CNT302 RepID=UPI00037AB54F
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIG74175.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis japonica.;"
PLM3-1_170_b1_sep16_scaffold_1352_18
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(13268..14089)
DNA (822bp) protein (274aa)
Putative uncharacterized protein Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F1N9_ACIC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACO32186.1}; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670 /; NBRC 15755 / NCIMB 13165 / 161).;"
PLM3-1_170_b1_sep16_scaffold_1352_19
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(14086..14718)
DNA (633bp) protein (211aa)
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Nitrolancetus hollandicus Lb RepID=I4EJJ5_9CHLR
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:CCF84857.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolancea hollandica Lb.;"
RNA polymerase, sigma-24 subunit, ECF subfamily
PLM3-1_170_b1_sep16_scaffold_1352_20
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(15029..16291)
DNA (1263bp) protein (421aa)
Hypothetical conserved protein Tax=uncultured candidate division OP1 bacterium RepID=H5SEV6_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3-1_170_b1_sep16_scaffold_1352_21
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(16288..17757)
DNA (1470bp) protein (490aa)
Hypothetical conserved protein Tax=uncultured candidate division OP1 bacterium RepID=H5SEV7_9BACT
Protein of unknown function (DUF1800)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
PLM3-1_170_b1_sep16_scaffold_1352_22
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(17998..19212)
DNA (1215bp) protein (405aa)
geranylgeranyl reductase bin=CNBR_ACIDO species=Terriglobus saanensis genus=Terriglobus taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
geranylgeranyl reductase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_1352_23
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(19214..21901)
DNA (2688bp) protein (896aa)
LmbE family protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q026C8_SOLUE
LmbE family protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3-1_170_b1_sep16_scaffold_1352_24
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(21933..23075)
DNA (1143bp) protein (381aa)
glycosyl transferase family protein bin=CNBR_ACIDO species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
glycosyl transferase family protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3-1_170_b1_sep16_scaffold_1352_25
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(23109..23885)
DNA (777bp) protein (259aa)
LmbE family protein bin=CNBR_ACIDO species=Paenibacillus massiliensis genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM3-1_170_b1_sep16_scaffold_1352_26
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(23875..25116)
DNA (1242bp) protein (414aa)
FAD dependent oxidoreductase bin=CNBR_ACIDO species=Deinococcus geothermalis genus=Deinococcus taxon_order=Deinococcales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
amino acid oxidase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM3-1_170_b1_sep16_scaffold_1352_27
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

25245..25430
DNA (186bp) protein (62aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
PLM3-1_170_b1_sep16_scaffold_1352_28
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

25502..25849
DNA (348bp) protein (116aa)
DNA-binding domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_1352_29
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25850..26257
DNA (408bp) protein (136aa)
Ribonuclease VapC Tax=Gordonia amarae NBRC 15530 RepID=G7GWL1_9ACTO
twitching motility protein PilT
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM3-1_170_b1_sep16_scaffold_1352_30
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(26424..27959)
DNA (1536bp) protein (512aa)
putative FAD-binding protein bin=bin3_NC10 species=Rheinheimera perlucida genus=Rheinheimera taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
Displaying items 1-30 of 32 in total

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