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PLM3-1_170_b1_sep16_scaffold_1527

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_1527_1
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(213..752)
DNA (540bp) protein (180aa)
Uncharacterized protein Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SLX5_METPP
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
PLM3-1_170_b1_sep16_scaffold_1527_2
unknown

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comp(1076..1273)
DNA (198bp) protein (66aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_1527_3
Advenella kashmirensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1320..2324)
DNA (1005bp) protein (335aa)
ABC transporter substrate-binding protein Tax=Advenella kashmirensis W13003 RepID=V8QUB9_9BURK
ABC transporter substrate-binding protein {ECO:0000313|EMBL:ETF02920.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella kashmirensis W13003.;"
ABC nitrate/sulfonate/bicarbonate family transporter periplasmic ligand binding protein
PLM3-1_170_b1_sep16_scaffold_1527_4
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

2767..3051
DNA (285bp) protein (95aa)
Uncharacterized protein Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07SI8_RHOP5
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3-1_170_b1_sep16_scaffold_1527_5
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

3048..3554
DNA (507bp) protein (169aa)
GCN5-related N-acetyltransferase Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q210U6_RHOPB
GCN5-like N-acetyltransferase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3-1_170_b1_sep16_scaffold_1527_trna_1
unknown

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3808..3894
DNA (87bp)
transferRNA Ser
PLM3-1_170_b1_sep16_scaffold_1527_6
unknown

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comp(4439..4816)
DNA (378bp) protein (126aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_1527_7
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

5075..6019
DNA (945bp) protein (315aa)
Helix-turn-helix domain protein Tax=Roseiflexus sp. (strain RS-1) RepID=A5UQQ0_ROSS1
helix-turn-helix domain-containing protein
Helix-turn-helix domain protein {ECO:0000313|EMBL:ABQ88953.1}; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus sp. (strain RS-1).;"
PLM3-1_170_b1_sep16_scaffold_1527_8
Cyanothece sp. PCC 7822, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(6144..7784)
DNA (1641bp) protein (547aa)
hypothetical protein Tax=Scytonema hofmanni RepID=UPI000347E1E2
hypothetical protein
Tetratricopeptide TPR_2 repeat protein {ECO:0000313|EMBL:ADN16338.1}; Flags: Precursor;; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7822).;"
PLM3-1_170_b1_sep16_scaffold_1527_9
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(7768..8109)
DNA (342bp) protein (114aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
PLM3-1_170_b1_sep16_scaffold_1527_10

Not on your lists

8283..8738
DNA (456bp) protein (152aa)
hypothetical protein, partial Tax=Parcubacteria bacterium SCGC AAA040-L21 RepID=UPI0003687702
Type IV pilus assembly protein PilB {ECO:0000313|EMBL:KKR55442.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_40_23.;"
pilF; Tfp pilus assembly pathway, ATPase PilB
PLM3-1_170_b1_sep16_scaffold_1527_11
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(8792..9640)
DNA (849bp) protein (283aa)
Putative uncharacterized protein Tax=uncultured marine microorganism HF4000_009L19 RepID=B3T1F1_9ZZZZ
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM3-1_170_b1_sep16_scaffold_1527_12
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(9640..10047)
DNA (408bp) protein (136aa)
hypothetical protein Tax=Methylosinus sp. LW4 RepID=UPI00036BEC4D
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM3-1_170_b1_sep16_scaffold_1527_13
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(10160..11995)
DNA (1836bp) protein (612aa)
hypothetical protein bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
Displaying 14 items

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