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PLM3-1_170_b1_sep16_scaffold_1630

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_1630_1
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(3..2876)
DNA (2874bp) protein (958aa)
Cna protein B-type domain protein Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LJJ4_CHLTF
Outer membrane receptor for ferrienterochelin and colicins {ECO:0000313|EMBL:CDM66299.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Cna protein B-type domain-containing protein
PLM3-1_170_b1_sep16_scaffold_1630_2
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(2873..4042)
DNA (1170bp) protein (390aa)
Putative uncharacterized protein Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IKS3_KORVE
Uncharacterized protein {ECO:0000313|EMBL:CDM66300.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
PLM3-1_170_b1_sep16_scaffold_1630_3
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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4100..4522
DNA (423bp) protein (141aa)
peroxiredoxin, OsmC subfamily (EC:1.11.1.15)
peroxiredoxin Tax=Verrucomicrobium spinosum RepID=UPI00017458B9
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_1630_4
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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4643..5560
DNA (918bp) protein (306aa)
peptidase M23B bin=CNBR_ACIDO species=Pelosinus fermentans genus=Pelosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
M24/M37 family peptidase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM3-1_170_b1_sep16_scaffold_1630_5
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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5657..8578
DNA (2922bp) protein (974aa)
protein translocase subunit SecA; K03070 preprotein translocase subunit SecA bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
secA; preprotein translocase subunit SecA
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_1630_6
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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8603..10141
DNA (1539bp) protein (513aa)
guaB; inosine-5'-monophosphate dehydrogenase; K00088 IMP dehydrogenase [EC:1.1.1.205] bin=CNBR_ACIDO species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
guaB; inosine-5'-monophosphate dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3-1_170_b1_sep16_scaffold_1630_7
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(10171..10590)
DNA (420bp) protein (140aa)
hypothetical protein; K06925 UPF0079 ATP-binding protein bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM3-1_170_b1_sep16_scaffold_1630_8
R_Acidobacteria_68_18, Acidobacteria, Bacteria

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comp(10673..12256)
DNA (1584bp) protein (528aa)
carbohydrate kinase bin=CNBR_ACIDO species=Desulfotomaculum nigrificans genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
carbohydrate kinase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM3-1_170_b1_sep16_scaffold_1630_9
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

12603..13538
DNA (936bp) protein (312aa)
branched-chain amino acid aminotransferase (EC:2.6.1.42)
Branched chain amino acid aminotransferase apoenzyme bin=GWC2_Nitrospirae_57_13 species=unknown genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM3-1_170_b1_sep16_scaffold_1630_10
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(13535..15568)
DNA (2034bp) protein (678aa)
glycine dehydrogenase, decarboxylating bin=bin1_lowGC species=Fulvivirga imtechensis genus=Fulvivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=bin1_lowGC organism_group=Unknown_CP
glycine dehydrogenase, decarboxylating
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
Displaying 10 items

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