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PLM3-1_170_b1_sep16_scaffold_1944

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_1944_1
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(3..1418)
DNA (1416bp) protein (472aa)
acetaldehyde dehydrogenase; K00132 acetaldehyde dehydrogenase (acetylating) [EC:1.2.1.10] bin=CNBR_ACIDO species=Desulfotomaculum reducens genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
acetaldehyde dehydrogenase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_1944_2
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(1429..1704)
DNA (276bp) protein (92aa)
carboxysome shell protein Tax=Streptococcus ovis RepID=UPI000377D7F5
eutM; putative ethanolamine utilization protein EutM
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_1944_3
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

1889..2770
DNA (882bp) protein (294aa)
id=12554100 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_1944_4
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

2864..3505
DNA (642bp) protein (214aa)
lytic transglycosylase bin=CNBR_ACIDO species=Methyloversatilis universalis genus=Methyloversatilis taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
lytic murein transglycosylase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3-1_170_b1_sep16_scaffold_1944_5
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

3569..4774
DNA (1206bp) protein (402aa)
type II secretion system protein; K02653 type IV pilus assembly protein PilC bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
type II secretion system protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM3-1_170_b1_sep16_scaffold_1944_6
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

4796..6445
DNA (1650bp) protein (550aa)
type II secretion system protein E; K02652 type IV pilus assembly protein PilB bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
type II secretion system protein E
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
PLM3-1_170_b1_sep16_scaffold_1944_7
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

6442..7404
DNA (963bp) protein (321aa)
hypothetical protein; K02662 type IV pilus assembly protein PilM bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_1944_8
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

7540..8100
DNA (561bp) protein (187aa)
fimbrial assembly family protein; K02663 type IV pilus assembly protein PilN bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3-1_170_b1_sep16_scaffold_1944_9
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

8097..8684
DNA (588bp) protein (196aa)
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM3-1_170_b1_sep16_scaffold_1944_10
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

8668..9252
DNA (585bp) protein (195aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00036D0E29
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM3-1_170_b1_sep16_scaffold_1944_11
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

9253..10737
DNA (1485bp) protein (495aa)
type II secretory pathway, component PulD bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
type II secretory pathway, component PulD
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
Displaying 11 items

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