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PLM3-1_170_b1_sep16_scaffold_3154

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_3154_1
unknown

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comp(3..176)
DNA (174bp) protein (58aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_3154_2
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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comp(118..1641)
DNA (1524bp) protein (508aa)
Putative glycine betaine/carnitine/choline ABC transporter (Permease and substrate binding protein) Tax=Candidatus Methylomirabilis oxyfera RepID=D5MH20_9BACT
glycine betaine/carnitine/choline ABC transporter (permease and substrate binding protein)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3-1_170_b1_sep16_scaffold_3154_3
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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comp(1638..2402)
DNA (765bp) protein (255aa)
Glycine betaine/carnitine/choline ABC transporter (ATP-binding protein) (EC:3.6.3.-)
Putative Glycine betaine/carnitine/choline ABC transporter (ATP-binding protein) Tax=Candidatus Methylomirabilis oxyfera RepID=D5MH21_9BACT
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3-1_170_b1_sep16_scaffold_3154_4
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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comp(2409..3374)
DNA (966bp) protein (322aa)
Uncharacterized protein Tax=Sorangium cellulosum So0157-2 RepID=S4Y614_SORCE
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3-1_170_b1_sep16_scaffold_3154_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(3374..3643)
DNA (270bp) protein (90aa)
hypothetical protein Tax=Thiobacillus thioparus RepID=UPI000377E898
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG92268.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM3-1_170_b1_sep16_scaffold_3154_6
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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comp(3643..4560)
DNA (918bp) protein (306aa)
Uncharacterized protein Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WP55_9GAMM
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3-1_170_b1_sep16_scaffold_3154_7
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(4756..5175)
DNA (420bp) protein (140aa)
MarR family transcriptional regulator bin=CNBR_ACIDO species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Transcriptional regulator MarR family {ECO:0000313|EMBL:EHN10378.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
MarR family transcriptional regulator
PLM3-1_170_b1_sep16_scaffold_3154_8
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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5242..7521
DNA (2280bp) protein (760aa)
ATP-dependent protease La (EC:3.4.21.53); K01338 ATP-dependent Lon protease [EC:3.4.21.53] bin=CNBR_ACIDO species=Conexibacter woesei genus=Conexibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973};; ATP-dependent protease La {ECO:0000256|HAMAP-Rule:MF_01973}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
ATP-dependent protease La (EC:3.4.21.53)
PLM3-1_170_b1_sep16_scaffold_3154_9
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(7563..8273)
DNA (711bp) protein (237aa)
Ubiquinone/menaquinone biosynthesis methyltransferase UbiE Tax=Desmospora sp. 8437 RepID=F5SFI1_9BACL
Methyltransferase type 11 {ECO:0000313|EMBL:ETK38121.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
methyltransferase type 11
Displaying 9 items

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