ggKbase home page

PLM3-1_170_b1_sep16_scaffold_3603

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_3603_1
unknown

Not on your lists

2..295
DNA (294bp) protein (98aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_3603_2
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(311..925)
DNA (615bp) protein (205aa)
recombinase bin=CNBR_ACIDO species=Ochrobactrum anthropi genus=Ochrobactrum taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
recombinase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_3603_3
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

1211..2473
DNA (1263bp) protein (421aa)
Conserved uncharacterized protein Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FT93_STIAD
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM3-1_170_b1_sep16_scaffold_3603_4
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

3418..4689
DNA (1272bp) protein (424aa)
hypothetical protein Tax=Bradyrhizobium japonicum RepID=UPI00037FED6A
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM3-1_170_b1_sep16_scaffold_3603_5
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(4799..6070)
DNA (1272bp) protein (424aa)
Uncharacterized protein Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SFS4_METPP
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_3603_6
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6140..8074)
DNA (1935bp) protein (645aa)
Uncharacterized protein Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SFS3_METPP
Uncharacterized protein {ECO:0000313|EMBL:ETX02433.1}; Flags: Fragment;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
hypothetical protein
PLM3-1_170_b1_sep16_scaffold_3603_7
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(8100..8945)
DNA (846bp) protein (282aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_3603_8
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(9237..10589)
DNA (1353bp) protein (451aa)
Putative uncharacterized protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q020C4_SOLUE
thiol-disulfide isomerase or thioredoxin
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_3603_9
unknown

Not on your lists

10727..10831
DNA (105bp) protein (35aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_3603_10
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

10854..11699
DNA (846bp) protein (282aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00035E0153
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM3-1_170_b1_sep16_scaffold_3603_11
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(11662..12873)
DNA (1212bp) protein (404aa)
Calcium-binding EF-hand-containing protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q025F7_SOLUE
peroxiredoxin
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM3-1_170_b1_sep16_scaffold_3603_12
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(12977..13528)
DNA (552bp) protein (184aa)
Uncharacterized protein conserved in cyanobacteria Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5CZ30_PELTS
Uma2; hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_3603_13
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(14606..15292)
DNA (687bp) protein (229aa)
hypothetical protein Tax=Verrucomicrobium sp. 3C RepID=UPI00036C13E2
ISTde1, transposase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
Displaying 13 items

View Taxonomy