ggKbase home page

PLM3-1_170_b1_sep16_scaffold_2109

Search features with annotation key words

Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_2109_1
RLO_PLX_64_10, Bacteria

Not on your lists

1..1425
DNA (1425bp) protein (475aa)
Putative ammonium transporter sll0108 Tax=uncultured Desulfobacterium sp. RepID=E1YHY0_9DELT
ammonium transporter
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM3-1_170_b1_sep16_scaffold_2109_2
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

1539..2744
DNA (1206bp) protein (402aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037CBACB
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_2109_3
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

2920..5535
DNA (2616bp) protein (872aa)
metal dependent phosphohydrolase (EC:2.7.7.59); K00990 [protein-PII] uridylyltransferase [EC:2.7.7.59] bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
metal dependent phosphohydrolase (EC:2.7.7.59)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM3-1_170_b1_sep16_scaffold_2109_4
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

5522..5854
DNA (333bp) protein (111aa)
glnB; nitrogen regulatory protein P-II 1; K04751 nitrogen regulatory protein P-II 1 bin=CNBR_ACIDO species=Sphingobium sp. SYK-6 genus=Sphingobium taxon_order=Sphingomonadales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
glnB; nitrogen regulatory protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM3-1_170_b1_sep16_scaffold_2109_5
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5992..7407
DNA (1416bp) protein (472aa)
glnA; glutamine synthetase bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
glnA; glutamine synthetase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b1_sep16_scaffold_2109_6
CG_Delta_02, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7484..10324
DNA (2841bp) protein (947aa)
(glutamate--ammonia-ligase) adenylyltransferase (EC:2.7.7.42)
Glutamate-ammonia-ligase adenylyltransferase bin=GWB2_Deltaproteobacteria_65_81 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=CG_Delta_02
Displaying 6 items

View Taxonomy