ggKbase home page

PLM3-1_170_b1_sep16_scaffold_2578

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_2578_1
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43..1383)
DNA (1341bp) protein (447aa)
Cytochrome-c domain-containing protein Tax=Rhizobium etli bv. mimosae str. Mim1 RepID=S5S0M0_RHIET
cytochrome-c domain-containing protein
Cytochrome-c domain-containing protein {ECO:0000313|EMBL:AGS20896.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. Mim1.;"
PLM3-1_170_b1_sep16_scaffold_2578_2
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

1826..2050
DNA (225bp) protein (75aa)
Putative uncharacterized protein bin=GWD2_Nitrospirae-related_57_8 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM3-1_170_b1_sep16_scaffold_2578_3
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

2216..2815
DNA (600bp) protein (200aa)
transporter Tax=Variovorax paradoxus RepID=UPI000365F8F5
transport-associated
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3-1_170_b1_sep16_scaffold_2578_4
unknown

Not on your lists

3086..3328
DNA (243bp) protein (81aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_2578_5
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3321..4067)
DNA (747bp) protein (249aa)
Cysteine-rich domain protein Tax=Corynebacterium striatum ATCC 6940 RepID=C2CRU3_CORST
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM3-1_170_b1_sep16_scaffold_2578_6
Cyanothece sp. PCC 7425, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

4232..5176
DNA (945bp) protein (315aa)
Ribonuclease BN Tax=Cyanothece sp. (strain PCC 7425 / ATCC 29141) RepID=B8HSD7_CYAP4
ribonuclease BN
Ribonuclease BN {ECO:0000313|EMBL:ACL44243.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7425 / ATCC 29141).;"
PLM3-1_170_b1_sep16_scaffold_2578_7
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

6266..6847
DNA (582bp) protein (194aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
PLM3-1_170_b1_sep16_scaffold_2578_8
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(7036..7923)
DNA (888bp) protein (296aa)
Serine/threonine protein phosphatase Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D9D5_SINAD
serine/threonine protein phosphatase
Serine/threonine protein phosphatase {ECO:0000313|EMBL:AGA25428.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
PLM3-1_170_b1_sep16_scaffold_2578_9

Not on your lists

8136..8798
DNA (663bp) protein (221aa)
Transcriptional regulator, Crp/Fnr family Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01TA6_SOLUE
Crp/FNR family transcriptional regulator {ECO:0000313|EMBL:AHZ45554.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Crp/Fnr family transcriptional regulator
PLM3-1_170_b1_sep16_scaffold_2578_10
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

8959..9333
DNA (375bp) protein (125aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
Displaying 10 items

View Taxonomy