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PLM3-1_170_b1_sep16_scaffold_2647

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_2647_1
unknown

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comp(1..63)
DNA (63bp) protein (21aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_2647_2
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(257..454)
DNA (198bp) protein (66aa)
hypothetical protein Tax=Methylosinus sp. LW4 RepID=UPI0003680020
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM3-1_170_b1_sep16_scaffold_2647_3
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists


858..1634
DNA (777bp) protein (259aa)
30S ribosomal protein S1; K02945 small subunit ribosomal protein S1 bin=CNBR_ACIDO species=Geobacter bemidjiensis genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ribosomal protein S1
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3-1_170_b1_sep16_scaffold_2647_4
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists


1691..2293
DNA (603bp) protein (201aa)
30S ribosomal protein S1; K02945 small subunit ribosomal protein S1 bin=CNBR_ACIDO species=Geobacter bemidjiensis genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
rpsA; 30S ribosomal protein S1
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM3-1_170_b1_sep16_scaffold_2647_5

Not on your lists

comp(2445..3521)
DNA (1077bp) protein (359aa)
Putative NHL repeat protein Tax=uncultured marine microorganism HF4000_009L19 RepID=B3T1G4_9ZZZZ
Putative NHL repeat protein {ECO:0000313|EMBL:ABZ06423.1}; species="unclassified sequences; environmental samples.;" source="uncultured marine microorganism HF4000_009L19.;"
hypothetical protein
PLM3-1_170_b1_sep16_scaffold_2647_6
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(3644..4723)
DNA (1080bp) protein (360aa)
hypothetical protein Tax=Gemmata obscuriglobus RepID=UPI00016C5363
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM3-1_170_b1_sep16_scaffold_2647_7
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(5111..6115)
DNA (1005bp) protein (335aa)
Putative uncharacterized protein Tax=uncultured marine microorganism HF4000_009L19 RepID=B3T1F1_9ZZZZ
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM3-1_170_b1_sep16_scaffold_2647_8
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

6394..6753
DNA (360bp) protein (120aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM3-1_170_b1_sep16_scaffold_2647_9
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

6772..8562
DNA (1791bp) protein (597aa)
OmpA-like protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM3-1_170_b1_sep16_scaffold_2647_10
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

8873..9100
DNA (228bp) protein (76aa)
Uncharacterized protein Tax=Nostoc sp. (strain ATCC 29411 / PCC 7524) RepID=K9QZD1_NOSS7
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
PLM3-1_170_b1_sep16_scaffold_2647_11
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

9471..10088
DNA (618bp) protein (206aa)
Uncharacterized protein Tax=Ralstonia RepID=E2T222_9RALS
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM3-1_170_b1_sep16_scaffold_2647_12
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10337..10822
DNA (486bp) protein (162aa)
hypothetical protein bin=bin5_DeltaP species=Nitrosomonas sp. genus=Nitrosomonas taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
protein of unknown function DUF336
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
PLM3-1_170_b1_sep16_scaffold_2647_13
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

11248..12369
DNA (1122bp) protein (374aa)
Putative uncharacterized protein Tax=uncultured marine microorganism HF4000_009G21 RepID=B3T1B0_9ZZZZ
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM3-1_170_b1_sep16_scaffold_2647_14
unknown

Not on your lists

12532..12600
DNA (69bp) protein (23aa)

This feature has no annotations

Displaying 14 items

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