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PLM3-1_170_b1_sep16_scaffold_8839

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_8839_1
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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3..380
DNA (378bp) protein (126aa)
two component, sigma54 specific, Fis family transcriptional regulator; K13599 two-component system, NtrC family, nitrogen regulation response regulator NtrX bin=CNBR_ACIDO species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Fis family transcriptional regulator
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_8839_2
unknown

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comp(468..998)
DNA (531bp) protein (177aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_8839_3
R_Acidobacteria_68_18, Acidobacteria, Bacteria

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1124..2071
DNA (948bp) protein (316aa)
NAD-dependent epimerase/dehydratase; K01784 UDP-glucose 4-epimerase [EC:5.1.3.2] bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
NAD-dependent epimerase/dehydratase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM3-1_170_b1_sep16_scaffold_8839_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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2087..3079
DNA (993bp) protein (331aa)
Putative esterase Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CEJ0_THET1
Predicted esterase {ECO:0000313|EMBL:CDM66435.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
putative esterase
PLM3-1_170_b1_sep16_scaffold_8839_5
Nocardioidaceae bacterium Broad-1, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(3129..3407)
DNA (279bp) protein (93aa)
CTP synthase Tax=Nocardioidaceae bacterium Broad-1 RepID=E9V284_9ACTO
CTP synthase {ECO:0000313|EMBL:EGD40461.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae.;" source="Nocardioidaceae bacterium Broad-1.;"
hypothetical protein
PLM3-1_170_b1_sep16_scaffold_8839_6
R_Acidobacteria_67_21, Acidobacteria, Bacteria

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comp(3411..5075)
DNA (1665bp) protein (555aa)
Twin-arginine translocation pathway signal Tax=Pseudovibrio sp. JE062 RepID=B6R972_9RHOB
hydrolase transmembrane protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
PLM3-1_170_b1_sep16_scaffold_8839_7
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(5179..5460)
DNA (282bp) protein (94aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
PLM3-1_170_b1_sep16_scaffold_8839_8
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(5429..8254)
DNA (2826bp) protein (942aa)
TonB-dependent receptor bin=CNBR_ACIDO species=Terriglobus saanensis genus=Terriglobus taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
TonB-dependent receptor
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
Displaying 8 items

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