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PLM3-1_170_b1_sep16_scaffold_202

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_202_1
R_Rhodocyclales_63_24, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..1750)
DNA (1749bp) protein (583aa)
C4-dicarboxylate ABC transporter Tax=Herbaspirillum sp. JC206 RepID=UPI00031CEE15
TRAP transporter, 4TM/12TM fusion protein
Tax=RIFCSPLOWO2_02_FULL_Rhodocyclales_63_24_curated
PLM3-1_170_b1_sep16_scaffold_202_2
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1810..2763)
DNA (954bp) protein (318aa)
C4-dicarboxylate ABC transporter Tax=Ideonella sp. B508-1 RepID=UPI00034DBCC3
C4-dicarboxylate ABC transporter {ECO:0000313|EMBL:KIF80527.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
putative TRAP-type uncharacterized transport system, periplasmic component
PLM3-1_170_b1_sep16_scaffold_202_3
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(2829..3992)
DNA (1164bp) protein (388aa)
periplasmic protein; K07080 bin=bin9_gal15 species=Ramlibacter tataouinensis genus=Ramlibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin9_gal15 organism_group=GAL15
TRAP transporter solute receptor, TAXI family
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3-1_170_b1_sep16_scaffold_202_4
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(4018..4437)
DNA (420bp) protein (140aa)
histone methyltransferase bin=CNBR_ACIDO species=Ascaris suum genus=Ascaris taxon_order=Ascaridida taxon_class=Chromadorea phylum=Nematoda tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
nuclear protein SET
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3-1_170_b1_sep16_scaffold_202_5
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

4697..5740
DNA (1044bp) protein (348aa)
radical SAM family Fe-S protein bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
radical SAM protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM3-1_170_b1_sep16_scaffold_202_6
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

5816..6838
DNA (1023bp) protein (341aa)
Radical SAM superfamily Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LDD8_CHLTF
radical SAM protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM3-1_170_b1_sep16_scaffold_202_7
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

6967..7464
DNA (498bp) protein (166aa)
cytochrome C Tax=Sphingomonas phyllosphaerae RepID=UPI0003B7A137
cytochrome C
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_202_8
BJP_08E140C01_Anaerolineales_40_8, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(7470..7811)
DNA (342bp) protein (114aa)
Uncharacterized protein Tax=Methyloglobulus morosus KoM1 RepID=V5CAN5_9GAMM
hypothetical protein
Tax=BJP_08E140C01_Anaerolineales_40_8
PLM3-1_170_b1_sep16_scaffold_202_9
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(7829..9235)
DNA (1407bp) protein (469aa)
Glucose sorbosone dehydrogenase Tax=uncultured Acidobacteria bacterium RepID=H5SPQ4_9BACT
glucose/sorbosone dehydrogenase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_202_10
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

9446..10723
DNA (1278bp) protein (426aa)
hypothetical protein bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3-1_170_b1_sep16_scaffold_202_11
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

10784..11263
DNA (480bp) protein (160aa)
ahpC/TSA family protein; K03564 peroxiredoxin Q/BCP [EC:1.11.1.15] bin=CNBR_ACIDO species=Myxococcus sp. (contaminant ex DSM 436) genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ahpC/TSA family protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_202_12
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(11283..12683)
DNA (1401bp) protein (467aa)
Amidase (EC:3.5.1.4)
Amidase Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1CA12_SPHTD
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM3-1_170_b1_sep16_scaffold_202_13
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(12705..13205)
DNA (501bp) protein (167aa)
Uncharacterized protein Tax=Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 / VKM B-1628) RepID=G7WIJ8_DESOD
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_202_14
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

13503..14774
DNA (1272bp) protein (424aa)
Uncharacterized conserved protein Tax=uncultured Oceanospirillales bacterium HF4000_23O15 RepID=E0XW08_9GAMM
NHL repeat-containing protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_202_15
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(14976..18584)
DNA (3609bp) protein (1203aa)
DNA polymerase III subunit alpha (EC:2.7.7.7); K14162 error-prone DNA polymerase [EC:2.7.7.7] bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
DNA polymerase III subunit alpha (EC:2.7.7.7)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
PLM3-1_170_b1_sep16_scaffold_202_16
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(18598..20403)
DNA (1806bp) protein (602aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037614A8
DNA repair nucleotidyltransferase/DNA polymerase-like protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM3-1_170_b1_sep16_scaffold_202_17
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists


comp(20405..21232)
DNA (828bp) protein (276aa)
RecA/RadA recombinase-like bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
recombinase A
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_202_18
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

21330..22646
DNA (1317bp) protein (439aa)
Major facilitator superfamily MFS_1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q026B2_SOLUE
major facilitator transporter
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_202_19
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

22921..25638
DNA (2718bp) protein (906aa)
Serine/threonine protein kinase Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01RF6_SOLUE
serine/threonine protein kinase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_202_20
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(25663..26346)
DNA (684bp) protein (228aa)
Uncharacterized protein Tax=Bradyrhizobium sp. STM 3843 RepID=H0TDF4_9BRAD
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3-1_170_b1_sep16_scaffold_202_21
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

26476..27444
DNA (969bp) protein (323aa)
ArsR family transcriptional regulator bin=CNBR_ACIDO species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ArsR family transcriptional regulator
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_202_22
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

27432..31151
DNA (3720bp) protein (1240aa)
Methionine synthase Tax=Sorangium cellulosum So0157-2 RepID=S4Y8P4_SORCE
methionine synthase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
Displaying 22 items

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