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PLM3-1_170_b1_sep16_scaffold_563

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_563_1
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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3..581
DNA (579bp) protein (193aa)
Conserved domain protein Tax=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) RepID=Q60AE3_METCA
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_563_2
RBG_13_Deltaproteobacteria_51_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(758..1690)
DNA (933bp) protein (311aa)
hypothetical protein Tax=Streptomyces sp. AA1529 RepID=UPI000310C5A4
lipid A biosynthesis acyltransferase
Tax=RBG_13_Deltaproteobacteria_51_10_curated
PLM3-1_170_b1_sep16_scaffold_563_3
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

comp(1693..2376)
DNA (684bp) protein (228aa)
Glycosyl transferase family 2 Tax=Pedosphaera parvula Ellin514 RepID=B9XG99_9BACT
glycosyl transferase, group 2 family protein
Tax=RBG_13_Acidobacteria_68_16_curated
PLM3-1_170_b1_sep16_scaffold_563_4
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

comp(2373..4793)
DNA (2421bp) protein (807aa)
Uncharacterized protein {ECO:0000313|EMBL:KDA54846.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
Putative uncharacterized protein bin=GWC2_Deltaproteobacteria_55_46 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
exporter
PLM3-1_170_b1_sep16_scaffold_563_5
Geobacter lovleyi, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4835..6367
DNA (1533bp) protein (511aa)
Cobalamin B12-binding domain protein Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3E498_GEOLS
cobalamin B12-binding domain-containing protein
Cobalamin B12-binding domain protein {ECO:0000313|EMBL:ACD95919.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ).;"
PLM3-1_170_b1_sep16_scaffold_563_6
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(6382..7041)
DNA (660bp) protein (220aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_563_7
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

7067..8314
DNA (1248bp) protein (416aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 Tax=Alicyclobacillus acidocaldarius (strain Tc-4-1) RepID=F8IHC9_ALIAT
fabF; 3-oxoacyl-(acyl-carrier-protein) synthase 2
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_563_8
S_Thermoanaerobacterales_50_218, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

8356..9111
DNA (756bp) protein (252aa)
3-oxoacyl-ACP reductase (EC:1.1.1.100)
hypothetical protein Tax=Fervidibacteria bacterium JGI 0000001-D5 RepID=UPI00036C4935
Tax=S_Thermoanaerobacterales_50_218
PLM3-1_170_b1_sep16_scaffold_563_9
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

9122..9391
DNA (270bp) protein (90aa)
Acyl carrier protein Tax=Chthoniobacter flavus Ellin428 RepID=B4D8Y9_9BACT
acyl carrier protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_563_10
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

9388..10254
DNA (867bp) protein (289aa)
Uncharacterized protein Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q270_9BACT
polysaccharide deactylase family protein
Tax=RBG_16_Nitrospirae_64_22_curated
PLM3-1_170_b1_sep16_scaffold_563_11
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

10251..13166
DNA (2916bp) protein (972aa)
Uncharacterized protein Tax=Holophaga foetida DSM 6591 RepID=H1P261_9BACT
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_563_12
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

13173..14135
DNA (963bp) protein (321aa)
Uncharacterized protein {ECO:0000313|EMBL:KDA53168.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
hypothetical protein bin=CNBR_ACIDO species=Patulibacter americanus genus=Patulibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
group 1 glycosyl transferase
PLM3-1_170_b1_sep16_scaffold_563_13
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

14132..15349
DNA (1218bp) protein (406aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 Tax=Desulfotomaculum acetoxidans (strain ATCC 49208 / DSM 771 / VKM B-1644) RepID=C8W585_DESAS
3-oxoacyl-ACP synthase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_563_14

Not on your lists

comp(15412..17046)
DNA (1635bp) protein (545aa)
hypothetical protein Tax=Nocardiopsis RepID=UPI000347DACF
Uncharacterized protein {ECO:0000313|EMBL:AIA11363.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
FAD dependent oxidoreductase family protein
PLM3-1_170_b1_sep16_scaffold_563_15
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

17681..18088
DNA (408bp) protein (136aa)
Uncharacterized protein Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KUJ5_METHD
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3-1_170_b1_sep16_scaffold_563_16
unknown

Not on your lists

18438..19091
DNA (654bp) protein (218aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_563_17
unknown

Not on your lists

19129..19929
DNA (801bp) protein (267aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_563_18
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

20050..20625
DNA (576bp) protein (192aa)
RNA polymerase sigma factor cnrH Tax=Rhodopirellula maiorica SM1 RepID=M5RL61_9PLAN
cnrH; RNA polymerase sigma factor cnrH
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3-1_170_b1_sep16_scaffold_563_19
unknown

Not on your lists

comp(20523..21134)
DNA (612bp) protein (204aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_563_20
candidate division Zixibacteria, Bacteria

Not on your lists

21714..22853
DNA (1140bp) protein (380aa)
Serine/threonine protein kinase bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
Serine/threonine protein kinase {ECO:0000313|EMBL:EQB63028.1}; species="Bacteria.;" source="candidate division Zixibacteria bacterium RBG-1.;"
hypothetical protein
PLM3-1_170_b1_sep16_scaffold_563_21
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(22893..25649)
DNA (2757bp) protein (919aa)
Hypothetical conserved protein Tax=uncultured Acidobacteria bacterium RepID=H5SFF1_9BACT
TonB-dependent receptor
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM3-1_170_b1_sep16_scaffold_563_22
unknown

Not on your lists

comp(25716..26363)
DNA (648bp) protein (216aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_563_23
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

26748..27032
DNA (285bp) protein (95aa)
Addiction module toxin, RelE/StbE family Tax=Bradyrhizobium sp. ORS 285 RepID=H0S2F5_9BRAD
toxin Y4kP
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
PLM3-1_170_b1_sep16_scaffold_563_24
unknown

Not on your lists

comp(27118..27714)
DNA (597bp) protein (199aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_563_25
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(28847..29884)
DNA (1038bp) protein (346aa)
hypothetical protein Tax=Schlesneria paludicola RepID=UPI00029AC148
phytochrome sensor protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
PLM3-1_170_b1_sep16_scaffold_563_26
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

30744..31787
DNA (1044bp) protein (348aa)
6-phosphogluconate dehydrogenase Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI0003827202
6-phosphogluconate dehydrogenase
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
PLM3-1_170_b1_sep16_scaffold_563_27
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31780..33144
DNA (1365bp) protein (455aa)
Glucose-6-phosphate 1-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497}; Short=G6PD {ECO:0000256|HAMAP-Rule:MF_00966};; EC=1.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus DSM 2262.;"
Glucose-6-phosphate 1-dehydrogenase Tax=Cystobacter fuscus DSM 2262 RepID=S9NST7_9DELT
glucose-6-phosphate dehydrogenase
PLM3-1_170_b1_sep16_scaffold_563_28
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33141..33899
DNA (759bp) protein (253aa)
pgl; 6-phosphogluconolactonase (EC:3.1.1.31)
6-phosphogluconolactonase {ECO:0000313|EMBL:EAU65974.1}; EC=3.1.1.31 {ECO:0000313|EMBL:EAU65974.1};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Stigmatella aurantiaca (strain DW4/3-1).;"
6-phosphogluconolactonase Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08ZT9_STIAD
PLM3-1_170_b1_sep16_scaffold_563_29
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

34164..35453
DNA (1290bp) protein (430aa)
circadian clock protein KaiC (EC:2.7.11.1)
Putative circadian clock protein, KaiC bin=GWE2_Bacteroidetes_40_15 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWE2_Bacteroidetes_40_15 organism_group=Bacteroidetes organism_desc=Good +
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
Displaying 29 items

View Taxonomy