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PLM3-1_170_b1_sep16_scaffold_879

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_879_1
Thauera phenylacetica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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144..518
DNA (375bp) protein (125aa)
Uncharacterized protein Tax=Thauera phenylacetica B4P RepID=N6YUS4_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:ENO98016.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera phenylacetica B4P.;"
hypothetical protein
PLM3-1_170_b1_sep16_scaffold_879_2
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

592..1275
DNA (684bp) protein (228aa)
Uncharacterized protein Tax=Candidatus Microthrix parvicella RN1 RepID=R4YWK2_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CCM62373.1}; species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
PLM3-1_170_b1_sep16_scaffold_879_3
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

1426..2277
DNA (852bp) protein (284aa)
hypothetical protein Tax=unclassified Aminicenantes RepID=UPI00036D8E41
phage integrase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
PLM3-1_170_b1_sep16_scaffold_879_trna_1
unknown

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comp(2292..2375)
DNA (84bp)
transferRNA Leu
PLM3-1_170_b1_sep16_scaffold_879_4
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

2607..4355
DNA (1749bp) protein (583aa)
signal peptide peptidase A; K04773 protease IV [EC:3.4.21.-] bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
signal peptide peptidase SppA, 67K type
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM3-1_170_b1_sep16_scaffold_879_5
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(4433..6361)
DNA (1929bp) protein (643aa)
PpiC-type peptidyl-prolyl cis-trans isomerase; K03770 peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] bin=CNBR_ACIDO species=Geopsychrobacter electrodiphilus genus=Geopsychrobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
peptidylprolyl cis-trans isomerase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM3-1_170_b1_sep16_scaffold_879_6
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

6961..7968
DNA (1008bp) protein (336aa)
GAF sensor-containing diguanylate cyclase bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
GAF sensor-containing diguanylate cyclase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_879_7
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

7982..9007
DNA (1026bp) protein (342aa)
rod shape-determining protein MreB; K03569 rod shape-determining protein MreB and related proteins bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
rod shape-determining protein MreB
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3-1_170_b1_sep16_scaffold_879_8
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

9061..9927
DNA (867bp) protein (289aa)
mreC; rod shape-determining protein MreC; K03570 rod shape-determining protein MreC bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
rod shape-determining protein MreC
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM3-1_170_b1_sep16_scaffold_879_9
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

9924..10493
DNA (570bp) protein (190aa)
rod shape-determining protein MreD; K03571 rod shape-determining protein MreD bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_879_10
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

10490..12364
DNA (1875bp) protein (625aa)
Peptidoglycan glycosyltransferase Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01YX1_SOLUE
penicillin-binding protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM3-1_170_b1_sep16_scaffold_879_11
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

12383..13483
DNA (1101bp) protein (367aa)
rod shape-determining protein RodA; K05837 rod shape determining protein RodA bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
rod shape-determining protein RodA
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
PLM3-1_170_b1_sep16_scaffold_879_12
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

13724..15244
DNA (1521bp) protein (507aa)
ribonuclease; K08301 ribonuclease G [EC:3.1.26.-] bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ribonuclease G
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM3-1_170_b1_sep16_scaffold_879_13
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

15365..15895
DNA (531bp) protein (177aa)
id=12555479 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3-1_170_b1_sep16_scaffold_879_14
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(16351..19038)
DNA (2688bp) protein (896aa)
peptidase M14 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B386AD
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_879_15
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(19119..20507)
DNA (1389bp) protein (463aa)
Metal dependent phosphohydrolase Tax=Geobacter sp. (strain M18) RepID=E8WKY0_GEOS8
metal dependent phosphohydrolase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM3-1_170_b1_sep16_scaffold_879_16

Not on your lists

comp(20574..22781)
DNA (2208bp) protein (736aa)
Putative glycosyl transferase {ECO:0000313|EMBL:AIF34073.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
HEAT-like repeat-containing protein bin=GWC2_Pelobacter_58_13 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
HEAT-like repeat-containing protein
PLM3-1_170_b1_sep16_scaffold_879_17
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

22884..24212
DNA (1329bp) protein (443aa)
pyrimidine-nucleoside phosphorylase; K00756 pyrimidine-nucleoside phosphorylase [EC:2.4.2.2] bin=CNBR_ACIDO species=Gemmata obscuriglobus genus=Gemmata taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
pyrimidine-nucleoside phosphorylase (EC:2.4.2.4)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM3-1_170_b1_sep16_scaffold_879_18
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

24222..25589
DNA (1368bp) protein (456aa)
Na+ dependent nucleoside transporter domain protein Tax=Gemmata obscuriglobus RepID=UPI00016C5700
NupC family nucleoside transporter
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3-1_170_b1_sep16_scaffold_879_19
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

25663..26487
DNA (825bp) protein (275aa)
Purine nucleoside phosphorylase Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01VX9_SOLUE
inosine guanosine and xanthosine phosphorylase family protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_879_20
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

26500..26904
DNA (405bp) protein (135aa)
cytidine deaminase (EC:3.5.4.5)
Cytidine deaminase Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01VX8_SOLUE
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM3-1_170_b1_sep16_scaffold_879_21
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

26981..27151
DNA (171bp) protein (57aa)
translation initiation factor 2B subunit I; K08963 methylthioribose-1-phosphate isomerase [EC:5.3.1.23] bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
translation initiation factor 2B subunit I
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
Displaying 22 items

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