ggKbase home page

PLM3-1_170_b1_sep16_scaffold_4230_3

Organism: PLM6_170_b1_sep16_Acidobacteria_62_11

near complete RP 49 / 55 MC: 3 BSCG 50 / 51 MC: 1 ASCG 13 / 38
Location: comp(3656..4114)

Top 3 Functional Annotations

Value Algorithm Source
putative RNA-binding protein bin=CNBR_ACIDO species=Desulfosporosinus acidiphilus genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 51.3
  • Coverage: 150.0
  • Bit_score: 154
  • Evalue 4.70e-35
single-stranded nucleic acid binding R3H domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 32.5
  • Coverage: 154.0
  • Bit_score: 90
  • Evalue 4.00e-16
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 58.1
  • Coverage: 148.0
  • Bit_score: 183
  • Evalue 1.70e-43

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Acidobacteria_67_21 → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 459
ATGAGCACATCGCTGGAAACACAAATCGTTGAATTCATACGGCAGGTCACTGCCGCCATGGGCCTCACACTCGAGGCGCATGTTGAGCGCACGCCAGATGGGATCCGCGTCGATCTGCAGGGAGAGGACGGTGCCGCGCTGCTCGTCCGGCGCGGCGAGCCGCTGCAGGCATTTCAACATCTCATCGATGCGATTTTCCGGGATCAGATGGCGCAGCACGGCCGGTTGCTGCTCGACTGCATGGGATTTCGCCGCGACAAAGATCTCGAGCTGCGACAGATGGCCAAGTTTCTTGCCGACAAAGCCAAATCGACCGGAGTCGAACAACAGATTGGGCCGCTCAACGCGTACGAACGTCGAATCGTGCACCTCATGGTTGCCGAAGATCCTGCAGTCGCATCGGAGAGCATCGGCGACGCCGCGATGAAGACGGTCATTATTTCGAAAAGAAGAAGCTGA
PROTEIN sequence
Length: 153
MSTSLETQIVEFIRQVTAAMGLTLEAHVERTPDGIRVDLQGEDGAALLVRRGEPLQAFQHLIDAIFRDQMAQHGRLLLDCMGFRRDKDLELRQMAKFLADKAKSTGVEQQIGPLNAYERRIVHLMVAEDPAVASESIGDAAMKTVIISKRRS*