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PLM3-1_170_b1_sep16_scaffold_4230

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_4230_1
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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comp(247..2103)
DNA (1857bp) protein (619aa)
gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; K03495 tRNA uridine 5-carboxymethylaminomethyl modification enzyme bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
gidA; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3-1_170_b1_sep16_scaffold_4230_2
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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comp(2105..3646)
DNA (1542bp) protein (514aa)
tRNA modification GTPase TrmE; K03650 tRNA modification GTPase [EC:3.6.-.-] bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
tRNA modification GTPase TrmE
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM3-1_170_b1_sep16_scaffold_4230_3
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(3656..4114)
DNA (459bp) protein (153aa)
putative RNA-binding protein bin=CNBR_ACIDO species=Desulfosporosinus acidiphilus genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
single-stranded nucleic acid binding R3H domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
PLM3-1_170_b1_sep16_scaffold_4230_4
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(4127..5839)
DNA (1713bp) protein (571aa)
YidC/Oxa1 family membrane protein insertase; K03217 preprotein translocase subunit YidC bin=CNBR_ACIDO species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3-1_170_b1_sep16_scaffold_4230_5
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5857..6081)
DNA (225bp) protein (75aa)
Putative membrane protein insertion efficiency factor Tax=Desulfovibrio piger ATCC 29098 RepID=B6WWF3_9DELT
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
YidD
PLM3-1_170_b1_sep16_scaffold_4230_6
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(6096..6491)
DNA (396bp) protein (132aa)
ribonuclease P protein component; K03536 ribonuclease P protein component [EC:3.1.26.5] bin=CNBR_ACIDO species=Nitrospina sp. AB-629-B18 genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ribonuclease P protein component
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM3-1_170_b1_sep16_scaffold_4230_7
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

7157..8515
DNA (1359bp) protein (453aa)
chromosomal replication initiator protein DnaA; K02313 chromosomal replication initiator protein bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
chromosomal replication initiator protein DnaA
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM3-1_170_b1_sep16_scaffold_4230_8
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

8779..9405
DNA (627bp) protein (209aa)
DNA polymerase III, beta subunit; K02338 DNA polymerase III subunit beta [EC:2.7.7.7] bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
DNA polymerase III subunit beta (EC:2.7.7.7)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
Displaying 8 items

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