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PLM3-1_170_b1_sep16_scaffold_4288

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_4288_1
CSP1_5_NC10, NC10, Bacteria

Not on your lists

1..846
DNA (846bp) protein (282aa)
multicopper oxidase, type 3 bin=bin3_NC10 species=Frankia sp. genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin3_NC10 organism_group=NC10
twin-arginine translocation pathway signal protein
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_4288_2
CSP1_5_NC10, NC10, Bacteria

Not on your lists

843..2066
DNA (1224bp) protein (408aa)
putative metal cation transporter bin=bin3_NC10 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin3_NC10 organism_group=NC10
putative metal cation transporter
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_4288_3
CSP1_5_NC10, NC10, Bacteria

Not on your lists

2115..2609
DNA (495bp) protein (165aa)
hypothetical protein bin=bin3_NC10 species=Hyphomicrobium sp. genus=Hyphomicrobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_4288_4
CSP1_5_NC10, NC10, Bacteria

Not on your lists

2624..3301
DNA (678bp) protein (226aa)
DtxR family iron (metal) dependent repressor; K03709 DtxR family transcriptional regulator, Mn-dependent transcriptional regulator bin=bin3_NC10 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin3_NC10 organism_group=NC10
DtxR family iron (metal) dependent repressor
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_4288_5
CSP1_5_NC10, NC10, Bacteria

Not on your lists

3306..3692
DNA (387bp) protein (129aa)
cytochrome c family protein bin=bin3_NC10 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_4288_trna_1
unknown

Not on your lists

3707..3779
DNA (73bp)
transferRNA Ala
PLM3-1_170_b1_sep16_scaffold_4288_6
CSP1_5_NC10, NC10, Bacteria

Not on your lists

4274..4423
DNA (150bp) protein (50aa)
cspA; Cold shock protein, DNA binding bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
cspA; Cold shock protein, DNA binding
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_4288_7
CSP1_5_NC10, NC10, Bacteria

Not on your lists

4506..4862
DNA (357bp) protein (119aa)
id=14431415 bin=bin3_NC10 tax=bin3_NC10 organism_group=NC10
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_4288_8
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(5163..5669)
DNA (507bp) protein (169aa)
id=14431405 bin=bin3_NC10 tax=bin3_NC10 organism_group=NC10
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_4288_9
CSP1_5_NC10, NC10, Bacteria

Not on your lists

5933..6268
DNA (336bp) protein (112aa)
Uncharacterized protein bin=bin3_NC10 species=Nitrosospira sp. APG3 genus=Nitrosospira taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_4288_10
CSP1_5_NC10, NC10, Bacteria

Not on your lists

6318..7862
DNA (1545bp) protein (515aa)
FAD/FMN-dependent dehydrogenase bin=bin3_NC10 species=Nitrosospira sp. APG3 genus=Nitrosospira taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
FAD/FMN-dependent dehydrogenase
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_4288_11
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(7952..8326)
DNA (375bp) protein (125aa)
hypothetical protein bin=bin3_NC10 species=Klebsiella pneumoniae genus=Klebsiella taxon_order=Enterobacteriales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_4288_12
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(8432..8683)
DNA (252bp) protein (84aa)
id=14431409 bin=bin3_NC10 tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_4288_13
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(8708..9160)
DNA (453bp) protein (151aa)
hypothetical protein bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=Zetaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_4288_14
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(9219..9437)
DNA (219bp) protein (73aa)
hypothetical protein bin=bin3_NC10 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_4288_15
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(9526..10179)
DNA (654bp) protein (218aa)
id=14431412 bin=bin3_NC10 tax=bin3_NC10 organism_group=NC10
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_4288_16
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(10487..10852)
DNA (366bp) protein (122aa)
id=14431413 bin=bin3_NC10 tax=bin3_NC10 organism_group=NC10
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_4288_17
CSP1_5_NC10, NC10, Bacteria

Not on your lists

11204..11407
DNA (204bp) protein (68aa)
cspA; Cold shock protein, DNA binding bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
cspA; Cold shock protein, DNA binding
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_4288_18
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(11488..11763)
DNA (276bp) protein (92aa)
id=14431416 bin=bin3_NC10 tax=bin3_NC10 organism_group=NC10
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_4288_19
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(11857..12171)
DNA (315bp) protein (105aa)
hypothetical protein bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_4288_20
CSP1_5_NC10, NC10, Bacteria

Not on your lists

12315..13040
DNA (726bp) protein (242aa)
XRE family transcriptional regulator bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=bin7_NC10_sister organism_group=NC10
XRE family transcriptional regulator
Tax=CSP1_5_NC10
Displaying 21 items

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