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PLM3-1_170_b1_sep16_scaffold_1297

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_1297_1
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(3..170)
DNA (168bp) protein (56aa)
fusA; elongation factor G bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
FusA; translation elongation factors
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_1297_2
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(482..1114)
DNA (633bp) protein (211aa)
id=14428881 bin=bin3_NC10 tax=bin3_NC10 organism_group=NC10
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_1297_3
CSP1_5_NC10, NC10, Bacteria

Not on your lists


comp(1401..1838)
DNA (438bp) protein (146aa)
50S ribosomal protein L17 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
50S ribosomal protein L17
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_1297_4
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(1851..2861)
DNA (1011bp) protein (337aa)
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6) bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_1297_5
CSP1_5_NC10, NC10, Bacteria

Not on your lists


comp(2907..3536)
DNA (630bp) protein (210aa)
rpsD; 30S ribosomal protein S4 bin=bin3_NC10 species=Thermacetogenium phaeum genus=Thermacetogenium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin3_NC10 organism_group=NC10
rpsD; 30S ribosomal protein S4
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_1297_6
CSP1_5_NC10, NC10, Bacteria

Not on your lists


comp(3555..3959)
DNA (405bp) protein (135aa)
rpsK; 30S ribosomal protein S11 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
rpsK; 30S ribosomal protein S11
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_1297_7
CSP1_5_NC10, NC10, Bacteria

Not on your lists


comp(3971..4345)
DNA (375bp) protein (125aa)
30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 bin=bin3_NC10 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin3_NC10 organism_group=NC10
30S ribosomal protein S13
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_1297_8
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(4567..4812)
DNA (246bp) protein (82aa)
infA; translation initiation factor IF-1 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
infA; translation initiation factor IF-1
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_1297_9
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(4820..5668)
DNA (849bp) protein (283aa)
map; methionine aminopeptidase (EC:3.4.11.18) bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
map; methionine aminopeptidase (EC:3.4.11.18)
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_1297_10
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(5610..6254)
DNA (645bp) protein (215aa)
adk; adenylate kinase (EC:2.7.4.3); K00939 adenylate kinase [EC:2.7.4.3] bin=bin3_NC10 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin3_NC10 organism_group=NC10
adk; adenylate kinase (EC:2.7.4.3)
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_1297_11
CSP1_5_NC10, NC10, Bacteria

Not on your lists


comp(6299..7603)
DNA (1305bp) protein (435aa)
secY; preprotein translocase subunit SecY bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
secY; preprotein translocase subunit SecY
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_1297_12
CSP1_5_NC10, NC10, Bacteria

Not on your lists


comp(7600..8124)
DNA (525bp) protein (175aa)
50S ribosomal protein L15; K02876 large subunit ribosomal protein L15 bin=bin3_NC10 species=Thermoanaerobacterium xylanolyticum genus=Thermoanaerobacterium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin3_NC10 organism_group=NC10
50S ribosomal protein L15
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_1297_13
CSP1_5_NC10, NC10, Bacteria

Not on your lists


comp(8063..8581)
DNA (519bp) protein (173aa)
30S ribosomal protein S5 bin=bin3_NC10 species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
rpsE; 30S ribosomal protein S5
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_1297_14
CSP1_5_NC10, NC10, Bacteria

Not on your lists


comp(8729..9103)
DNA (375bp) protein (125aa)
50S ribosomal protein L18; K02881 large subunit ribosomal protein L18 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
50S ribosomal protein L18
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_1297_15
CSP1_5_NC10, NC10, Bacteria

Not on your lists


comp(9100..9651)
DNA (552bp) protein (184aa)
rplF; 50S ribosomal protein L6 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
rplF; 50S ribosomal protein L6
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_1297_16
CSP1_5_NC10, NC10, Bacteria

Not on your lists


comp(9771..10166)
DNA (396bp) protein (132aa)
30S ribosomal protein S8; K02994 small subunit ribosomal protein S8 bin=bin3_NC10 tax=bin3_NC10 organism_group=NC10
rpsH; 30S ribosomal protein S8
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_1297_17
CSP1_5_NC10, NC10, Bacteria

Not on your lists


comp(10468..11109)
DNA (642bp) protein (214aa)
rplE; 50S ribosomal protein L5 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
rplE; 50S ribosomal protein L5
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_1297_18
CSP1_5_NC10, NC10, Bacteria

Not on your lists


comp(11111..11440)
DNA (330bp) protein (110aa)
rplX; 50S ribosomal protein L24 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
rplX; 50S ribosomal protein L24
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_1297_19
CSP1_5_NC10, NC10, Bacteria

Not on your lists


comp(11481..11849)
DNA (369bp) protein (123aa)
rplN; 50S ribosomal protein L14 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
rplN; 50S ribosomal protein L14
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_1297_20
CSP1_5_NC10, NC10, Bacteria

Not on your lists


comp(11958..12215)
DNA (258bp) protein (86aa)
30S ribosomal protein S17; K02961 small subunit ribosomal protein S17 bin=bin3_NC10 species=Clostridium sp. CAG:440 genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin3_NC10 organism_group=NC10
rpsQ; 30S ribosomal protein S17
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_1297_21
CSP1_5_NC10, NC10, Bacteria

Not on your lists


comp(12217..12438)
DNA (222bp) protein (74aa)
50S ribosomal protein L29; K02904 large subunit ribosomal protein L29 bin=bin3_NC10 species=Sulfobacillus thermosulfidooxidans genus=Sulfobacillus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin3_NC10 organism_group=NC10
50S ribosomal protein L29
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_1297_22
CSP1_5_NC10, NC10, Bacteria

Not on your lists


comp(12435..12857)
DNA (423bp) protein (141aa)
rplP; 50S ribosomal protein L16 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
rplP; 50S ribosomal protein L16
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_1297_23
CSP1_5_NC10, NC10, Bacteria

Not on your lists


comp(12885..13580)
DNA (696bp) protein (232aa)
rpsC; 30S ribosomal protein S3 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
rpsC; 30S ribosomal protein S3
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_1297_24
CSP1_5_NC10, NC10, Bacteria

Not on your lists


comp(13595..13939)
DNA (345bp) protein (115aa)
rplV; 50S ribosomal protein L22 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
rplV; 50S ribosomal protein L22
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_1297_25
CSP1_5_NC10, NC10, Bacteria

Not on your lists


comp(13966..14250)
DNA (285bp) protein (95aa)
rpsS; 30S ribosomal protein S19; K02965 small subunit ribosomal protein S19 bin=bin3_NC10 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin3_NC10 organism_group=NC10
rpsS; 30S ribosomal protein S19
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_1297_26
CSP1_5_NC10, NC10, Bacteria

Not on your lists


comp(14399..15226)
DNA (828bp) protein (276aa)
rplB; 50S ribosomal protein L2 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
rplB; 50S ribosomal protein L2
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_1297_27
CSP1_5_NC10, NC10, Bacteria

Not on your lists


comp(15295..15582)
DNA (288bp) protein (96aa)
rplW; 50S ribosomal protein L23 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
rplW; 50S ribosomal protein L23
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_1297_28
CSP1_5_NC10, NC10, Bacteria

Not on your lists


comp(15579..16208)
DNA (630bp) protein (210aa)
50S ribosomal protein L4; K02926 large subunit ribosomal protein L4 bin=bin3_NC10 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin3_NC10 organism_group=NC10
50S ribosomal protein L4/L1e
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_1297_29
CSP1_5_NC10, NC10, Bacteria

Not on your lists


comp(16267..16917)
DNA (651bp) protein (217aa)
rplC; 50S ribosomal protein L3 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
rplC; 50S ribosomal protein L3
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_1297_30
CSP1_5_NC10, NC10, Bacteria

Not on your lists


comp(17006..17314)
DNA (309bp) protein (103aa)
rpsJ; 30S ribosomal protein S10 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
rpsJ; 30S ribosomal protein S10
Tax=CSP1_5_NC10
Displaying items 1-30 of 31 in total

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