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PLM3-1_170_b1_sep16_scaffold_1359

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_1359_1
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(3..632)
DNA (630bp) protein (210aa)
aroF; phospho-2-dehydro-3-deoxyheptonate aldolase (Phospho-2-keto-3-deoxyheptonate aldolase) (DAHP synthetase) (3-deoxy-D-arabino-heptulosonate 7-phosphate synthase) (EC:2.5.1.54) bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
aroF; phospho-2-dehydro-3-deoxyheptonate aldolase (Phospho-2-keto-3-deoxyheptonate aldolase) (DAHP synthetase) (3-deoxy-D-arabino-heptulosonate 7-phosphate synthase) (EC:2.5.1.54)
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_1359_2
CSP1_5_NC10, NC10, Bacteria

Not on your lists

948..1697
DNA (750bp) protein (250aa)
hypothetical protein bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_1359_3
CSP1_5_NC10, NC10, Bacteria

Not on your lists

1701..2219
DNA (519bp) protein (173aa)
ruvC; Crossover junction endodeoxyribonuclease ruvC (Holliday junction nuclease ruvC) (EC:3.1.22.4) bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
ruvC; Crossover junction endodeoxyribonuclease ruvC (Holliday junction nuclease ruvC) (EC:3.1.22.4)
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_1359_4
CSP1_5_NC10, NC10, Bacteria

Not on your lists

2182..2634
DNA (453bp) protein (151aa)
id=14431106 bin=bin3_NC10 tax=bin3_NC10 organism_group=NC10
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_1359_5
CSP1_5_NC10, NC10, Bacteria

Not on your lists

2650..3267
DNA (618bp) protein (206aa)
ruvA; Holliday junction DNA helicase ruvA bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
ruvA; Holliday junction DNA helicase ruvA
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_1359_6
CSP1_5_NC10, NC10, Bacteria

Not on your lists

3271..4320
DNA (1050bp) protein (350aa)
ruvB; Holliday junction DNA helicase ruvB bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
ruvB; Holliday junction DNA helicase ruvB
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_1359_7
CSP1_5_NC10, NC10, Bacteria

Not on your lists

4360..4611
DNA (252bp) protein (84aa)
hypothetical protein bin=bin3_NC10 species=Desulfotomaculum reducens genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_1359_8
CSP1_5_NC10, NC10, Bacteria

Not on your lists

4626..5717
DNA (1092bp) protein (364aa)
cell division protein; K06381 stage II sporulation protein D bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
cell division protein, SpoIID family
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_1359_9
CSP1_5_NC10, NC10, Bacteria

Not on your lists

5845..6894
DNA (1050bp) protein (350aa)
S-adenosylmethionine:tRNAribosyltransferase-isomerase; K07568 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:5.-.-.-] bin=bin3_NC10 species=Desulfurobacterium thermolithotrophum genus=Desulfurobacterium taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=bin3_NC10 organism_group=NC10
S-adenosylmethionine:tRNAribosyltransferase-isomerase
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_1359_10
CSP1_5_NC10, NC10, Bacteria

Not on your lists

6902..7561
DNA (660bp) protein (220aa)
id=14431112 bin=bin3_NC10 tax=bin3_NC10 organism_group=NC10
putative nuclease of the RecB family
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_1359_11
CSP1_5_NC10, NC10, Bacteria

Not on your lists

7558..8673
DNA (1116bp) protein (372aa)
tgt; tRNA-guanine transglycosylase (queuine/archaeosine tRNA-ribosyltransferase) (EC:2.4.2.29) bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
tgt; tRNA-guanine transglycosylase (queuine/archaeosine tRNA-ribosyltransferase) (EC:2.4.2.29)
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_1359_12
CSP1_5_NC10, NC10, Bacteria

Not on your lists

8704..9045
DNA (342bp) protein (114aa)
putative preprotein translocase, subunit YajC; K03210 preprotein translocase subunit YajC bin=bin3_NC10 species=Desulfobacterium autotrophicum genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
putative preprotein translocase, subunit YajC
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_1359_13
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(9136..10002)
DNA (867bp) protein (289aa)
hypothetical protein bin=bin3_NC10 species=Frankia alni genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_1359_14
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(10031..11203)
DNA (1173bp) protein (391aa)
ribosomal L11 methyltransferase; K06969 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] bin=bin3_NC10 species=Desulfotomaculum ruminis genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin3_NC10 organism_group=NC10
ribosomal L11 methyltransferase
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_1359_15
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(11299..12246)
DNA (948bp) protein (316aa)
hypothetical protein bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_1359_16
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(12350..12928)
DNA (579bp) protein (193aa)
silent information regulator protein Sir2; K12410 NAD-dependent deacetylase [EC:3.5.1.-] bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
silent information regulator protein Sir2
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_1359_17
CSP1_5_NC10, NC10, Bacteria

Not on your lists

13285..13869
DNA (585bp) protein (195aa)
hypothetical protein bin=bin3_NC10 species=Desulfohalobium retbaense genus=Desulfohalobium taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_1359_18
CSP1_5_NC10, NC10, Bacteria

Not on your lists

13895..14317
DNA (423bp) protein (141aa)
hypothetical protein bin=bin3_NC10 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_1359_19
CSP1_5_NC10, NC10, Bacteria

Not on your lists

14355..14816
DNA (462bp) protein (154aa)
Peptidase, M23/M37 family bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
Tax=CSP1_5_NC10
Displaying 19 items

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