ggKbase home page

PLM3-1_170_b1_sep16_scaffold_1773_11

Organism: PLM6_170_b1_sep16_Methylomirabilis_oxyfera_63_39

near complete RP 44 / 55 BSCG 46 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(11686..12327)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S2 bin=GWA2_Deltaproteo_65_63 species=Clostridium thermocellum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 59.3
  • Coverage: 182.0
  • Bit_score: 218
  • Evalue 4.80e-54
30S ribosomal protein S2 similarity KEGG
DB: KEGG
  • Identity: 39.1
  • Coverage: 279.0
  • Bit_score: 171
  • Evalue 1.90e-40
Tax=CSP1_5_NC10 similarity UNIPROT
DB: UniProtKB
  • Identity: 79.9
  • Coverage: 179.0
  • Bit_score: 271
  • Evalue 5.20e-70

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CSP1_5_NC10 → NC10 → Bacteria

Sequences

DNA sequence
Length: 642
ATGCCGGATGTGACGATGAAAGAGCTCTTGGAAGCGGGAGTGCACTTCGGACACCAGACCAAGCGCTGGAACCCGAAGATGAAGAAGTATCTCTTCGGGGAGCGGAACGGCATCTATATCATTGACCTCCAGAAGACCATCGAGAAGTTCAATGCCATCCGGAAGAGCGTCAACCGGCTCAAGCAACTGGAGCAGATGCAGTCGGATGGCAGCCTCGAGAGCCTCCCGAAAAAGGAGGCGCTGCATCTCGGCCGCGAGATCGCAAAGTTGAACCGGACGCTGGCGGGGATCAAGGAGATGAGTCGGCTGCCCGGGGCCATCGTGGTCGTTGATACCAAGAAGGAGCGGATCGCCGTTCGGGAGGCCCGGCGCCTTGGCATCCCCGTGGTGGCCTTGGTGGACACCAACTGTGATCCGGACGAGATTGACTACCCGATCCCGGGCAATGATGATGCCATCCGGTCCATCAAACTGATTACGTCCCTATTGGCCGACGCGGTTCTGGAGGGGCGGGGGGCGGTTGACCGGGGACTGGAACGGGAGATACTCGAAGGGGCCGAGGCGGCGGGTGAGGCCGCGGTCGGGGCGTTGCCGGCCGTCGAGGCGGGGGAGGTCGAGGCCCTGCACGATGTGGGCAGGTAA
PROTEIN sequence
Length: 214
MPDVTMKELLEAGVHFGHQTKRWNPKMKKYLFGERNGIYIIDLQKTIEKFNAIRKSVNRLKQLEQMQSDGSLESLPKKEALHLGREIAKLNRTLAGIKEMSRLPGAIVVVDTKKERIAVREARRLGIPVVALVDTNCDPDEIDYPIPGNDDAIRSIKLITSLLADAVLEGRGAVDRGLEREILEGAEAAGEAAVGALPAVEAGEVEALHDVGR*