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PLM3-1_170_b1_sep16_scaffold_1773

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_1773_1
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(6..2438)
DNA (2433bp) protein (811aa)
clpB; chaperone bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
clpB; chaperone
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_1773_2
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(2556..3275)
DNA (720bp) protein (240aa)
lolD; lipoprotein-releasing system ABC transporter ATP-binding protein lolD bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
lolD; lipoprotein-releasing system ABC transporter ATP-binding protein lolD
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_1773_3
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(3268..4533)
DNA (1266bp) protein (422aa)
lipoprotein releasing system transmembrane protein LolC/E family; K09808 lipoprotein-releasing system permease protein bin=bin3_NC10 species=Geobacter daltonii genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
lipoprotein releasing system transmembrane protein LolC/E family
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_1773_4
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(4530..6017)
DNA (1488bp) protein (496aa)
lysS; Lysyl-tRNA synthetase (LysRS) (EC:6.1.1.6) bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
lysS; Lysyl-tRNA synthetase (LysRS) (EC:6.1.1.6)
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_1773_5
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(6079..7179)
DNA (1101bp) protein (367aa)
prfB; peptide chain release factor 2 (RF-2) bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
prfB; peptide chain release factor 2 (RF-2)
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_1773_6
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(7183..8748)
DNA (1566bp) protein (522aa)
lnt; Apolipoprotein N-acyltransferase (ALP N-acyltransferase) (EC:2.3.1.-) bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
lnt; Apolipoprotein N-acyltransferase (ALP N-acyltransferase) (EC:2.3.1.-)
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_1773_7
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(8739..9566)
DNA (828bp) protein (276aa)
cdsA; phosphatidate cytidylyltransferase (CDP-diacylglycerol synthase) (EC:2.7.7.41) bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
cdsA; phosphatidate cytidylyltransferase (CDP-diacylglycerol synthase) (EC:2.7.7.41)
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_1773_8
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(9680..10237)
DNA (558bp) protein (186aa)
frr; ribosome recycling factor (Ribosome-releasing factor) (RRF) bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
frr; ribosome recycling factor (Ribosome-releasing factor) (RRF)
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_1773_9
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(10241..10957)
DNA (717bp) protein (239aa)
pyrH; Uridylate kinase (UK) (Uridine monophosphate kinase) (UMP kinase) (EC:2.7.4.-) bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
pyrH; Uridylate kinase (UK) (Uridine monophosphate kinase) (UMP kinase) (EC:2.7.4.-)
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_1773_10
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(10978..11637)
DNA (660bp) protein (220aa)
translation elongation factor Ts; K02357 elongation factor Ts bin=bin3_NC10 species=Alicyclobacillus acidocaldarius genus=Alicyclobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin3_NC10 organism_group=NC10
translation elongation factor Ts
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_1773_11
CSP1_5_NC10, NC10, Bacteria

Not on your lists


comp(11686..12327)
DNA (642bp) protein (214aa)
30S ribosomal protein S2 bin=GWA2_Deltaproteo_65_63 species=Clostridium thermocellum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
30S ribosomal protein S2
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_1773_12
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(13830..14429)
DNA (600bp) protein (200aa)
argC; N-acetyl-gamma-glutamyl-phosphate reductase (AGPR) (N-acetyl-glutamate semialdehyde dehydrogenase) (NAGSA dehydrogenase) (EC:1.2.1.38) bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
argC; N-acetyl-gamma-glutamyl-phosphate reductase
Tax=CSP1_5_NC10
Displaying 12 items

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