ggKbase home page

PLM3-1_170_b1_sep16_scaffold_4940_13

Organism: PLM6_170_b1_sep16_Methylomirabilis_oxyfera_63_39

near complete RP 44 / 55 BSCG 46 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(5209..5841)

Top 3 Functional Annotations

Value Algorithm Source
two component LuxR family transcriptional regulator bin=bin3_NC10 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=bin3_NC10 organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 91.0
  • Coverage: 210.0
  • Bit_score: 370
  • Evalue 7.50e-100
two component LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 50.2
  • Coverage: 211.0
  • Bit_score: 204
  • Evalue 2.60e-50
Tax=CSP1_5_NC10 similarity UNIPROT
DB: UniProtKB
  • Identity: 91.0
  • Coverage: 210.0
  • Bit_score: 370
  • Evalue 1.10e-99

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CSP1_5_NC10 → NC10 → Bacteria

Sequences

DNA sequence
Length: 633
ATGTCTGGCCAGGTCCTCATTGCGGATGATCATCCGCTTATCAGGCAGGGGCTGAGAAGCCTTTTGGAAAAGCACGGGTTCACCGTCGTCGGCGAGGCTGTGGACGGTCGCGAAGCCACTCAACTTGCCCAGGAACTCGAGCCCGATGTGGCCGTCCTTGACCTTGCCATGCCCCTCCTGAACGGCCTCGATGCCGCCCGGGAGATCATCCGGGCGTCCCGCCGCACGAAAACGATCCTGGTGACCGTCCACACGGCTGATCAGTACATCCTCGAGGCCCTCCAAGCTGGTGTCCGCGGCTACGTGTTGAAGAGCCAGGCGACCGCAGATCTCGTCCAGGCGGTCCACGAGGTTATGCGGGGTGGCCGCTACCTGAGCCCCGGGATCTCCGAGGCGGTCGTGCAGGCCTATCTGGGCAAGACCGATCTCCCCTCCGATCCCCTGACCTCCCGCGAGCGGGAAGTCCTCCACCTCATCGCCGAAGGGAAAAAGACAAAGGAAATTGCCGGGCTCCTTGGGGTGAGCGTCAAGACGATCGAATCCCACCGCACCCGGCTCATGGAGAAGCTCGACATCCGCCAGACGGCCGGTCTGGTGCGCTACGCCATCCGCCGCGGGCTGATCCAGCCCTGA
PROTEIN sequence
Length: 211
MSGQVLIADDHPLIRQGLRSLLEKHGFTVVGEAVDGREATQLAQELEPDVAVLDLAMPLLNGLDAAREIIRASRRTKTILVTVHTADQYILEALQAGVRGYVLKSQATADLVQAVHEVMRGGRYLSPGISEAVVQAYLGKTDLPSDPLTSREREVLHLIAEGKKTKEIAGLLGVSVKTIESHRTRLMEKLDIRQTAGLVRYAIRRGLIQP*