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PLM3-1_170_b1_sep16_scaffold_4940

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_4940_1
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(2..193)
DNA (192bp) protein (64aa)
hypothetical protein bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_4940_2
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(425..577)
DNA (153bp) protein (51aa)
id=14430683 bin=bin3_NC10 tax=bin3_NC10 organism_group=NC10
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_4940_3
Methylomicrobium album, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(899..1330)
DNA (432bp) protein (144aa)
Uncharacterized protein Tax=Methylomicrobium album BG8 RepID=H8GQ08_METAL
Uncharacterized protein {ECO:0000313|EMBL:EIC30948.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methylomicrobium album BG8.;"
PRC-barrel domain-containing protein
PLM3-1_170_b1_sep16_scaffold_4940_4
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(1493..1672)
DNA (180bp) protein (60aa)
hypothetical protein bin=bin3_NC10 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_4940_5
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(1803..2069)
DNA (267bp) protein (89aa)
id=14430371 bin=bin3_NC10 tax=bin3_NC10 organism_group=NC10
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_4940_6
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(2276..2479)
DNA (204bp) protein (68aa)
CsbD family protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q020G2_SOLUE
CsbD family protein
CsbD family protein {ECO:0000313|EMBL:ABJ84691.1}; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
PLM3-1_170_b1_sep16_scaffold_4940_7
unknown

Not on your lists

comp(2514..2729)
DNA (216bp) protein (72aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_4940_8
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(3059..3283)
DNA (225bp) protein (75aa)
id=14429682 bin=bin3_NC10 tax=bin3_NC10 organism_group=NC10
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_4940_9
Pseudomonas resinovorans, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3529..3696)
DNA (168bp) protein (56aa)
UPF0391 membrane protein PCA10_00860 Tax=Pseudomonas resinovorans NBRC 106553 RepID=S6AKT0_PSERE
hypothetical protein
UPF0391 membrane protein PCA10_00860 {ECO:0000256|HAMAP-Rule:MF_01361}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas resinovorans NBRC 106553.;"
PLM3-1_170_b1_sep16_scaffold_4940_10
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(4030..4200)
DNA (171bp) protein (57aa)
id=14429204 bin=bin3_NC10 tax=bin3_NC10 organism_group=NC10
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_4940_11
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(4440..4829)
DNA (390bp) protein (130aa)
DNA-binding response regulator bin=bin3_NC10 species=Kocuria atrinae genus=Kocuria taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin3_NC10 organism_group=NC10
DNA-binding response regulator
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_4940_12
unknown

Not on your lists

comp(4849..5043)
DNA (195bp) protein (65aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_4940_13
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(5209..5841)
DNA (633bp) protein (211aa)
two component LuxR family transcriptional regulator bin=bin3_NC10 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=bin3_NC10 organism_group=NC10
two component LuxR family transcriptional regulator
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_4940_14
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(5928..6308)
DNA (381bp) protein (127aa)
DNA-binding response regulator bin=bin3_NC10 species=Kocuria atrinae genus=Kocuria taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin3_NC10 organism_group=NC10
two component LuxR family transcriptional regulator
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_4940_15
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(6536..7753)
DNA (1218bp) protein (406aa)
putative PAS/PAC sensor histidine kinase bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin3_NC10 organism_group=NC10
PAS domain-containing protein
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_4940_16
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(7964..9304)
DNA (1341bp) protein (447aa)
major facilitator superfamily protein; K06902 MFS transporter, UMF1 family bin=bin3_NC10 species=Nitrosococcus halophilus genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
major facilitator superfamily protein
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_4940_17
CSP1_5_NC10, NC10, Bacteria

Not on your lists

9356..9832
DNA (477bp) protein (159aa)
Uncharacterized protein bin=bin3_NC10 species=uncultured Desulfofustis sp. PB-SRB1 genus=Desulfofustis taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_4940_18
unknown

Not on your lists

9953..10294
DNA (342bp) protein (114aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_4940_19
CSP1_5_NC10, NC10, Bacteria

Not on your lists

10347..10985
DNA (639bp) protein (213aa)
hypothetical protein bin=bin3_NC10 species=Methanococcoides burtonii genus=Methanococcoides taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_4940_20
CSP1_5_NC10, NC10, Bacteria

Not on your lists

11111..11296
DNA (186bp) protein (62aa)
id=14430021 bin=bin3_NC10 tax=bin3_NC10 organism_group=NC10
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_4940_21
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(11320..11775)
DNA (456bp) protein (152aa)
Tax=AR6
PLM3-1_170_b1_sep16_scaffold_4940_22
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(11835..12173)
DNA (339bp) protein (113aa)
id=14430022 bin=bin3_NC10 tax=bin3_NC10 organism_group=NC10
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_4940_23
CSP1_5_NC10, NC10, Bacteria

Not on your lists

12327..13934
DNA (1608bp) protein (536aa)
hypothetical protein bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_4940_24
CSP1_5_NC10, NC10, Bacteria

Not on your lists

14111..14632
DNA (522bp) protein (174aa)
hypothetical protein bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=CSP1_5_NC10
Displaying 24 items

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