ggKbase home page

PLM3-1_170_b1_sep16_scaffold_9331

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_9331_1
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

1..315
DNA (315bp) protein (105aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI000371AF25
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
PLM3-1_170_b1_sep16_scaffold_9331_2
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

407..2683
DNA (2277bp) protein (759aa)
Xanthine dehydrogenase, molybdenum binding subunit (EC:1.17.1.4)
Putative aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding domain protein Tax=uncultured marine microorganism HF4000_ANIW93N21 RepID=B3T365_9ZZZZ
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b1_sep16_scaffold_9331_3
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2712..3611
DNA (900bp) protein (300aa)
Molybdopterin dehydrogenase, FAD-binding bin=GWD2_Deltaproteobacteria_55_8 species=Rhodopseudomonas palustris genus=Rhodopseudomonas taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
molybdopterin dehydrogenase, FAD-binding
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM3-1_170_b1_sep16_scaffold_9331_4
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3604..4974
DNA (1371bp) protein (457aa)
(2Fe-2S)-binding protein bin=GWD2_Deltaproteobacteria_55_8 species=Rhodopseudomonas palustris genus=Rhodopseudomonas taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
(2Fe-2S)-binding protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b1_sep16_scaffold_9331_5

Not on your lists

5078..5629
DNA (552bp) protein (184aa)
Marine sediment metagenome DNA, contig: S06H3_L02911 {ECO:0000313|EMBL:GAI06358.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=Syntrophothermus lipocalidus genus=Syntrophothermus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
PLM3-1_170_b1_sep16_scaffold_9331_6
Bacillus mycoides, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5978..6484)
DNA (507bp) protein (169aa)
3-hydroxyanthranilate 3,4-dioxygenase {ECO:0000256|HAMAP-Rule:MF_00825}; EC=1.13.11.6 {ECO:0000256|HAMAP-Rule:MF_00825};; 3-hydroxyanthranilate oxygenase {ECO:0000256|HAMAP-Rule:MF_00825}; 3-hydroxyanthranilic acid dioxygenase {ECO:0000256|HAMAP-Rule:MF_00825}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus mycoides.;"
3-hydroxyanthranilate 3,4-dioxygenase Tax=Bacillus sp. 105MF RepID=UPI0003604017
3-hydroxyanthranilate 3,4-dioxygenase
PLM3-1_170_b1_sep16_scaffold_9331_7
RBG_13_Deltaproteobacteria_52_11b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6811..7002
DNA (192bp) protein (64aa)
DNA-binding protein Tax=Vibrio splendidus RepID=UPI0002F93E61
putative phage protein
Tax=RBG_13_Deltaproteobacteria_52_11b_curated
PLM3-1_170_b1_sep16_scaffold_9331_8
Brassica rapa, Brassica, Brassicales, rosids, Streptophyta, Viridiplantae

Not on your lists

7058..7990
DNA (933bp) protein (311aa)
Uncharacterized protein Tax=Brassica rapa subsp. pekinensis RepID=M4E6Q7_BRARP
Uncharacterized protein {ECO:0000313|EnsemblPlants:Bra024462.1-P}; species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.;" source="Brassica rapa subsp. pekinensis (Chinese cabbage) (Brassica; pekinensis).;"
hypothetical protein
PLM3-1_170_b1_sep16_scaffold_9331_9
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8006..8677)
DNA (672bp) protein (224aa)
Major facilitator superfamily MFS_1 bin=GWD2_Deltaproteobacteria_55_8 species=Acidimicrobium ferrooxidans genus=Acidimicrobium taxon_order=Acidimicrobiales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
major facilitator superfamiy transporter
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Displaying 9 items

View Taxonomy