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PLM3-1_170_b1_sep16_scaffold_6424

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_6424_1
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

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66..470
DNA (405bp) protein (135aa)
4a-hydroxytetrahydrobiopterin dehydratase (EC:4.2.1.96)
Putative pterin-4-alpha-carbinolamine dehydratase Tax=Nitrolancetus hollandicus Lb RepID=I4EJU4_9CHLR
Tax=RBG_16_Armatimonadetes_67_12_curated
PLM3-1_170_b1_sep16_scaffold_6424_2
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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744..1565
DNA (822bp) protein (274aa)
Amidohydrolase family protein bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
2-amino-3-carboxymuconate-6-semialdehyde decarboxylase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b1_sep16_scaffold_6424_3
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1581..2561)
DNA (981bp) protein (327aa)
4,5-dihydroxyphthalate decarboxylase Tax=Chryseobacterium taeanense RepID=UPI0003730372
4,5-dihydroxyphthalate decarboxylase
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3-1_170_b1_sep16_scaffold_6424_4
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2584..2751)
DNA (168bp) protein (56aa)
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b1_sep16_scaffold_6424_5
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2889..4256)
DNA (1368bp) protein (456aa)
Uncharacterized protein bin=GWC2_Methylomirabilis_70_24 species=Blastococcus saxobsidens genus=Blastococcus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
cycL; cytochrome c-type biogenesis protein cycL
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b1_sep16_scaffold_6424_6
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4253..4819)
DNA (567bp) protein (189aa)
Periplasmic thioredoxin (Cytochrome c biogenesis) bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
ccmG; periplasmic thioredoxin (cytochrome c biogenesis)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b1_sep16_scaffold_6424_7
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4886..6844)
DNA (1959bp) protein (653aa)
Cytochrome c-type biogenesis protein cycK bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
cycK; cytochrome c-type biogenesis protein cycK
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b1_sep16_scaffold_6424_8
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6841..7284)
DNA (444bp) protein (148aa)
Cytochrome c-type biogenesis protein ccmE (Cytochrome c maturation protein E) (Heme chaperone ccmE) bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
ccmE; cytochrome c-type biogenesis protein CcmE
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b1_sep16_scaffold_6424_9
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(7354..7914)
DNA (561bp) protein (187aa)
hypothetical protein bin=bin9_gal15 species=Halarchaeum acidiphilum genus=Halarchaeum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=bin9_gal15 organism_group=GAL15
hypothetical protein
Tax=CSP1_3_Armatimonadetes
PLM3-1_170_b1_sep16_scaffold_6424_10
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(7964..9220)
DNA (1257bp) protein (419aa)
hypothetical protein Tax=Cohnella laeviribosi RepID=UPI000374708E
type 11 methyltransferase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
PLM3-1_170_b1_sep16_scaffold_6424_11
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9422..9943)
DNA (522bp) protein (174aa)
Cytochrome c biogenesis protein CcdA bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ccdA; cytochrome c biogenesis protein CcdA
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Displaying 11 items

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