ggKbase home page

PLM3-1_170_b1_sep16_scaffold_6533

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_6533_1
unknown

Not on your lists

comp(1..78)
DNA (78bp) protein (26aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_6533_2
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(110..652)
DNA (543bp) protein (181aa)
UspA domain protein bin=GWD2_Deltaproteobacteria_55_8 species=Gemmata obscuriglobus genus=Gemmata taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
UspA domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b1_sep16_scaffold_6533_3
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(1376..2368)
DNA (993bp) protein (331aa)
phosphate transporter; K03306 inorganic phosphate transporter, PiT family bin=bin3_NC10 species=Hyphomicrobium zavarzinii genus=Hyphomicrobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
phosphate transporter
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_6533_4
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(2386..3000)
DNA (615bp) protein (205aa)
hypothetical protein bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_6533_5
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3091..4236)
DNA (1146bp) protein (382aa)
PrpF protein bin=GWD2_Deltaproteobacteria_55_8 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
PrpF protein
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM3-1_170_b1_sep16_scaffold_6533_6
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(4316..4717)
DNA (402bp) protein (134aa)
membrane protein of unknown function; K08972 putative membrane protein bin=bin1_lowGC tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=CSP1_2_Dadabacteria
PLM3-1_170_b1_sep16_scaffold_6533_7
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4951..5331
DNA (381bp) protein (127aa)
OmpA/MotB domain protein bin=GWD2_Deltaproteobacteria_55_8 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
peptidoglycan-binding protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b1_sep16_scaffold_6533_8
RLO_RIF03_38_15, RIF3, Bacteria

Not on your lists

comp(5761..6780)
DNA (1020bp) protein (340aa)
Putative uncharacterized protein bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_RIF03_38_15_curated
PLM3-1_170_b1_sep16_scaffold_6533_9
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7043..7789)
DNA (747bp) protein (249aa)
Zinc/iron transporter bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
divalent heavy-metal cations transporter
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Displaying 9 items

View Taxonomy