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PLM3-1_170_b1_sep16_scaffold_3757

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_3757_1
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2..259)
DNA (258bp) protein (86aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
glucose inhibited division protein A
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b1_sep16_scaffold_3757_2
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(346..1722)
DNA (1377bp) protein (459aa)
tRNA modification GTPase MnmE bin=GWD2_Deltaproteobacteria_55_8 species=Caldalkalibacillus thermarum genus=Caldalkalibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
tRNA modification GTPase TrmE
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM3-1_170_b1_sep16_scaffold_3757_3
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1944..3041)
DNA (1098bp) protein (366aa)
Possible Chloromuconate cycloisomerase bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Enterococcus taxon_order=Lactobacillales taxon_class=Bacilli phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b1_sep16_scaffold_3757_4
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3147..4160)
DNA (1014bp) protein (338aa)
Iron-binding periplasmic protein bin=GWD2_Deltaproteobacteria_55_8 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
putative ABC transporter substrate-binding protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b1_sep16_scaffold_3757_5
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4247..5347)
DNA (1101bp) protein (367aa)
dihydroorotate oxidase A (EC:1.3.98.1)
Dihydroorotate dehydrogenase (quinone) Tax=Chthonomonas calidirosea T49 RepID=S0EY53_9BACT
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b1_sep16_scaffold_3757_6
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5423..6217)
DNA (795bp) protein (265aa)
thiD; phosphomethylpyrimidine kinase (EC:2.7.4.7)
hypothetical protein Tax=Bacteria RepID=UPI0003756028
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b1_sep16_scaffold_3757_7
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6321..6713
DNA (393bp) protein (131aa)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3-1_170_b1_sep16_scaffold_3757_8
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6736..7176
DNA (441bp) protein (147aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XRM8_9BACT
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b1_sep16_scaffold_3757_9
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7365..7754
DNA (390bp) protein (130aa)
atm:ANT_01870 aroF; phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54); K03856 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b1_sep16_scaffold_3757_10
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7811..8428
DNA (618bp) protein (206aa)
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54 4.2.1.51)
phospho-2-dehydro-3-deoxyheptonate aldolase Tax=Spirochaeta bajacaliforniensis RepID=UPI00036C4233
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b1_sep16_scaffold_3757_11
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8435..8854
DNA (420bp) protein (140aa)
MOSC domain containing protein Tax=uncultured candidate division OP1 bacterium RepID=H5SFC5_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b1_sep16_scaffold_3757_12
unknown

Not on your lists

comp(8792..9133)
DNA (342bp) protein (114aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_3757_13
R_WOR_2_68_15, WOR-2, Bacteria

Not on your lists

9210..9830
DNA (621bp) protein (207aa)
id=1987432 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_WOR_2_68_15_curated
PLM3-1_170_b1_sep16_scaffold_3757_14
unknown

Not on your lists

9775..9936
DNA (162bp) protein (54aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_3757_15
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9917..10789
DNA (873bp) protein (291aa)
PEP phosphonomutase-like protein bin=bin7_NC10_sister species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
carboxyphosphonoenolpyruvate phosphonomutase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3-1_170_b1_sep16_scaffold_3757_16
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10803..10949
DNA (147bp) protein (49aa)
hypothetical protein bin=bin5_DeltaP species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin5_DeltaP organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
Displaying 16 items

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