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PLM3-1_170_b1_sep16_scaffold_1661

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_1661_1
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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comp(1..840)
DNA (840bp) protein (280aa)
atm:ANT_02270 nusA; transcription elongation protein NusA; K02600 N utilization substance protein A bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
nusA; transcription elongation protein NusA
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_1661_2
RBG_16_Chloroflexi_64_43_curated, Chloroflexi, Bacteria

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comp(1357..3138)
DNA (1782bp) protein (594aa)
cau:Caur_2320 aspartyl-tRNA synthetase; K01876 aspartyl-tRNA synthetase [EC:6.1.1.12] bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
aspartyl-tRNA synthetase
Tax=RBG_16_Chloroflexi_64_43_curated
PLM3-1_170_b1_sep16_scaffold_1661_3
Oscillochloris trichoides, Oscillochloris, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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3691..4179
DNA (489bp) protein (163aa)
Peptidase C14, caspase catalytic subunit p20 Tax=Oscillochloris trichoides DG-6 RepID=E1IEM0_9CHLR
Peptidase C14, caspase catalytic subunit p20 {ECO:0000313|EMBL:EFO80412.1}; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Oscillochloridaceae; Oscillochloris.;" source="Oscillochloris trichoides DG-6.;"
peptidase C14, caspase catalytic subunit p20
PLM3-1_170_b1_sep16_scaffold_1661_4
bacterium UASB14, Bacteria

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4179..5840
DNA (1662bp) protein (554aa)
Transcriptional regulator, CadC Tax=Caldithrix abyssi DSM 13497 RepID=H1XWU4_9BACT
WD-40 repeat protein {ECO:0000313|EMBL:GAK54714.1}; species="Bacteria.;" source="bacterium UASB14.;"
hypothetical protein
PLM3-1_170_b1_sep16_scaffold_1661_5
Enhygromyxa salina, Enhygromyxa, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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5925..8588
DNA (2664bp) protein (888aa)
Uncharacterized protein Tax=Sorangium cellulosum So0157-2 RepID=S4XNP7_SORCE
hypothetical protein
Putative integrin-like protein {ECO:0000313|EMBL:KIG15360.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Enhygromyxa.;" source="Enhygromyxa salina.;"
PLM3-1_170_b1_sep16_scaffold_1661_6
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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comp(8700..9320)
DNA (621bp) protein (207aa)
Putative uncharacterized protein Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8MZC2_ANATU
hypothetical protein
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_1661_7
GWB2_Chloroflexi_54_36_curated, Chloroflexi, Bacteria

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9483..10193
DNA (711bp) protein (237aa)
Isochorismatase family protein bin=GWB2_Chloroflexi_54_36 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
isochorismatase family protein
Tax=GWB2_Chloroflexi_54_36_curated
PLM3-1_170_b1_sep16_scaffold_1661_8
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

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10276..10629
DNA (354bp) protein (118aa)
TIGR02436 family protein bin=GWF2_Lentisphaerae_57_35 species=Desulfobacter postgatei genus=Desulfobacter taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
hypothetical protein
Tax=GWF2_Lentisphaerae_57_35_curated
PLM3-1_170_b1_sep16_scaffold_1661_9
Anaerolinea thermophila, Anaerolinea, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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10678..12009
DNA (1332bp) protein (444aa)
Putative uncharacterized protein Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N184_ANATU
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ64827.1}; species="Bacteria; Chloroflexi; Anaerolineae; Anaerolineales; Anaerolineaceae; Anaerolinea.;" source="Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 /; UNI-1).;"
PLM3-1_170_b1_sep16_scaffold_1661_10
RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(12213..12548)
DNA (336bp) protein (112aa)
Sterol-binding domain protein Tax=Rhodothermus marinus RepID=D0MDT3_RHOM4
Sterol-binding domain-containing protein
Tax=RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated
PLM3-1_170_b1_sep16_scaffold_1661_11
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

12830..14176
DNA (1347bp) protein (449aa)
hypothetical protein bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
hypothetical protein
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_1661_12
RBG_19FT_COMBO_Chloroflexi_56_12_curated, Chloroflexi, Bacteria

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14232..15482
DNA (1251bp) protein (417aa)
ftsZ; cell division protein FtsZ; K03531 cell division protein FtsZ bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
cell division protein FtsZ
Tax=RBG_19FT_COMBO_Chloroflexi_56_12_curated
PLM3-1_170_b1_sep16_scaffold_1661_13
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

15564..15824
DNA (261bp) protein (87aa)
hypothetical protein bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_1661_14
unknown

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15829..15999
DNA (171bp) protein (57aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_1661_15
unknown

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16034..16930
DNA (897bp) protein (299aa)

This feature has no annotations

Displaying 15 items

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