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PLM3-1_170_b1_sep16_scaffold_1928

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_1928_1
CG_Anaero_01, Anaerolineae, Chloroflexi, Bacteria

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2..394
DNA (393bp) protein (131aa)
ipa:Isop_1915 peptidase M20; K01295 glutamate carboxypeptidase [EC:3.4.17.11] bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
peptidase dimerization domain-containing protein
Tax=CG_Anaero_01
PLM3-1_170_b1_sep16_scaffold_1928_2
CG_Anaero_04, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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493..2013
DNA (1521bp) protein (507aa)
filamentation induced by cAMP protein Fic Tax=Prochlorothrix hollandica RepID=UPI00034CF438
filamentation induced by cAMP protein fic
Tax=CG_Anaero_04
PLM3-1_170_b1_sep16_scaffold_1928_3
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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2123..2632
DNA (510bp) protein (170aa)
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
ECF subfamily RNA polymerase sigma-24 subunit
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_1928_4
RBG_16_Gammaproteobacteria_66_13_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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2724..3404
DNA (681bp) protein (227aa)
Methylated-DNA--protein-cysteine methyltransferase Tax=uncultured Chloroflexi bacterium RepID=H5SLB0_9CHLR bin=RBG9 species=uncultured Chloroflexi bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
DNA-methyltransferase
Tax=RBG_16_Gammaproteobacteria_66_13_curated
PLM3-1_170_b1_sep16_scaffold_1928_5
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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3471..4418
DNA (948bp) protein (316aa)
hypothetical protein bin=RBG_19FT_COMBO_GAL15_69_19 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
hypothetical protein
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_1928_6

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4415..5356
DNA (942bp) protein (314aa)
Peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysins Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ARU8_RUBXD
Uncharacterized protein {ECO:0000313|EMBL:KKL92429.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysins
PLM3-1_170_b1_sep16_scaffold_1928_trna_1
unknown

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comp(5358..5440)
DNA (83bp)
transferRNA Leu
PLM3-1_170_b1_sep16_scaffold_1928_7
unknown

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5399..5587
DNA (189bp) protein (63aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_1928_8
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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6006..7040
DNA (1035bp) protein (345aa)
hypothetical protein Tax=Spirochaeta alkalica RepID=UPI000374A691
tryptophanyl-tRNA synthetase
Tax=BJP_IG2157_Anaerolineales_55_23
PLM3-1_170_b1_sep16_scaffold_1928_9

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comp(7091..7978)
DNA (888bp) protein (296aa)
Nitrilase {ECO:0000313|EMBL:AAR97413.1}; EC=3.5.5.7 {ECO:0000313|EMBL:AAR97413.1};; species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
Nitrilase Tax=uncultured organism RepID=Q6RWN6_9ZZZZ
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
PLM3-1_170_b1_sep16_scaffold_1928_10
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

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comp(8311..9198)
DNA (888bp) protein (296aa)
Uncharacterized protein Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C5M7_SPHTD
hypothetical protein
Tax=RBG_16_Chloroflexi_57_11_curated
PLM3-1_170_b1_sep16_scaffold_1928_11
Thermobaculum terrenum, Thermobaculum, Bacteria

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comp(9195..11363)
DNA (2169bp) protein (723aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase 1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CEQ0_THET1
PLM3-1_170_b1_sep16_scaffold_1928_12
RBG_16_Chloroflexi_48_8_curated, Chloroflexi, Bacteria

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comp(11551..12009)
DNA (459bp) protein (153aa)
peroxiredoxin (EC:1.11.1.15); K03564 peroxiredoxin Q/BCP [EC:1.11.1.15] bin=bin9_gal15 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin9_gal15 organism_group=GAL15
bcp; putative peroxiredoxin (EC:1.11.1.15)
Tax=RBG_16_Chloroflexi_48_8_curated
PLM3-1_170_b1_sep16_scaffold_1928_13
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

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comp(12057..12464)
DNA (408bp) protein (136aa)
Single-stranded DNA-binding protein bin=GWC2_Chloroflexi_49_37 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
single-strand binding protein
Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
PLM3-1_170_b1_sep16_scaffold_1928_14
CG_Anaero_01, Anaerolineae, Chloroflexi, Bacteria

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comp(12627..13508)
DNA (882bp) protein (294aa)
Release factor glutamine methyltransferase Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N3I3_ANATU
hemK; putative modification methylase HemK
Tax=CG_Anaero_01
PLM3-1_170_b1_sep16_scaffold_1928_15
Anaerolinea thermophila, Anaerolinea, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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comp(13505..14557)
DNA (1053bp) protein (351aa)
Peptide chain release factor 1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N3I4_ANATU
prfA; peptide chain release factor 1
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; species="Bacteria; Chloroflexi; Anaerolineae; Anaerolineales; Anaerolineaceae; Anaerolinea.;" source="Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 /; UNI-1).;"
PLM3-1_170_b1_sep16_scaffold_1928_16
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

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14742..15410
DNA (669bp) protein (223aa)
Putative carboxymethylenebutenolidase Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I293_CALAS
putative carboxymethylenebutenolidase
Putative carboxymethylenebutenolidase {ECO:0000313|EMBL:BAL99380.1}; species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
PLM3-1_170_b1_sep16_scaffold_1928_17
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

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15512..17923
DNA (2412bp) protein (804aa)
atm:ANT_10740 hypothetical protein; K07114 uncharacterized protein bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
hypothetical protein
Tax=RBG_13_Chloroflexi_68_17_curated
PLM3-1_170_b1_sep16_scaffold_1928_18
RBG_19FT_COMBO_Chloroflexi_50_10_curated, Chloroflexi, Bacteria

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comp(18606..19049)
DNA (444bp) protein (148aa)
Tax=RBG_19FT_COMBO_Chloroflexi_50_10_curated
PLM3-1_170_b1_sep16_scaffold_1928_19
unknown

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19447..19539
DNA (93bp) protein (31aa)

This feature has no annotations

Displaying 20 items

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