ggKbase home page

PLM3-1_170_b1_sep16_scaffold_6122

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_6122_1
GWC2_Chloroflexi_49_37_curated, Chloroflexi, Bacteria

Not on your lists

2..397
DNA (396bp) protein (132aa)
Protein NdvB bin=GWB2_Chloroflexi_49_20 species=Sinorhizobium fredii genus=Sinorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
cellobiose-phosphorylase
Tax=GWC2_Chloroflexi_49_37_curated
PLM3-1_170_b1_sep16_scaffold_6122_2
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

626..1264
DNA (639bp) protein (213aa)
Uncharacterized protein Tax=uncultured bacterium A1Q1_fos_1880 RepID=L7VVF9_9BACT
hypothetical protein
Tax=RBG_16_Desulfobacca_60_12_curated
PLM3-1_170_b1_sep16_scaffold_6122_3
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

1354..2538
DNA (1185bp) protein (395aa)
Peptidase M50 Tax=Nitrolancetus hollandicus Lb RepID=I4EGG7_9CHLR
Peptidase M50 {ECO:0000313|EMBL:CCF83779.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolancea hollandica Lb.;"
peptidase M50
PLM3-1_170_b1_sep16_scaffold_6122_4
Deinococcus geothermalis, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

2700..3062
DNA (363bp) protein (121aa)
Uncharacterized protein Tax=Deinococcus geothermalis (strain DSM 11300) RepID=Q1IYD0_DEIGD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF45754.1}; species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus geothermalis (strain DSM 11300).;"
PLM3-1_170_b1_sep16_scaffold_6122_5

Not on your lists

3114..3317
DNA (204bp) protein (68aa)
Uncharacterized protein Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CGW5_THET1
Uncharacterized protein {ECO:0000313|EMBL:KKN10446.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
PLM3-1_170_b1_sep16_scaffold_6122_6
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

3321..3785
DNA (465bp) protein (155aa)
CBS domain containing protein Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CGW6_THET1
hypothetical protein
CBS domain containing protein {ECO:0000313|EMBL:ACZ42987.1}; species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
PLM3-1_170_b1_sep16_scaffold_6122_7
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3896..4822
DNA (927bp) protein (309aa)
Ribokinase Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MES5_CORCM
rbsK; ribokinase
Ribokinase {ECO:0000313|EMBL:AFE10086.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086; / M2) (Myxococcus coralloides).;"
PLM3-1_170_b1_sep16_scaffold_6122_8
unknown

Not on your lists

4819..4962
DNA (144bp) protein (48aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_6122_9
RBG_16_Chloroflexi_64_43_curated, Chloroflexi, Bacteria

Not on your lists

4908..5741
DNA (834bp) protein (278aa)
Putative DNA-formamidopyrimidine glycosylase Tax=Leptospira licerasiae serovar Varillal str. VAR 010 RepID=I0XVN3_9LEPT bin=RBG9 species=Leptospira licerasiae genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=RBG9 organism_group=Chloroflexi
formamidopyrimidine-DNA glycosidase
Tax=RBG_16_Chloroflexi_64_43_curated
PLM3-1_170_b1_sep16_scaffold_6122_10
Chthonomonas calidirosea, Chthonomonas, Chthonomonadales, Chthonomonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(5767..5991)
DNA (225bp) protein (75aa)
Uncharacterized conserved protein Tax=Chthonomonas calidirosea T49 RepID=S0EWF2_9BACT
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:CCW35744.1}; species="Bacteria; Armatimonadetes; Chthonomonadetes; Chthonomonadales; Chthonomonadaceae; Chthonomonas.;" source="Chthonomonas calidirosea (strain DSM 23976 / ICMP 18418 / T49).;"
Displaying 10 items

View Taxonomy