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PLM3-1_170_b1_sep16_scaffold_3202

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_3202_1
RBG_13_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

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2..3490
DNA (3489bp) protein (1163aa)
Uncharacterized protein Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I7P9_CALAS
hypothetical protein
Tax=RBG_13_Chloroflexi_56_8_curated
PLM3-1_170_b1_sep16_scaffold_3202_2
unknown

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comp(3361..3867)
DNA (507bp) protein (169aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_3202_3
Peptococcaceae bacterium SCADC1_2_3, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4031..4273)
DNA (243bp) protein (81aa)
Putative uncharacterized protein Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PV16_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KFD41764.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium SCADC1_2_3.;"
Protein of unknown function DUF2283
PLM3-1_170_b1_sep16_scaffold_3202_4
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

4524..4952
DNA (429bp) protein (143aa)
hypothetical protein OsccyDRAFT_2849 bin=GWF2_Methylomirabilis_70_14 species=Oscillatoriales cyanobacterium JSC-12 genus=unknown taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=CG_Anaero_02
PLM3-1_170_b1_sep16_scaffold_3202_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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5365..5670
DNA (306bp) protein (102aa)
DNA polymerase beta domain protein region Tax=Candidatus Methylomirabilis oxyfera RepID=D5MMK1_9BACT
Predicted nucleotidyltransferase {ECO:0000313|EMBL:CDM67175.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
DNA polymerase beta domain-containing protein region
PLM3-1_170_b1_sep16_scaffold_3202_6
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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5657..5998
DNA (342bp) protein (114aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MMK2_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE70124.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM3-1_170_b1_sep16_scaffold_3202_7
RBG_16_Gallionellales_57_15_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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6245..7960
DNA (1716bp) protein (572aa)
DNA methylase N-4/N-6 domain protein Tax=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) RepID=B4SDR7_PELPB
DNA methylase N-4/N-6 domain-containing protein
Tax=RBG_16_Gallionellales_57_15_curated
PLM3-1_170_b1_sep16_scaffold_3202_8
bacterium UASB270, Bacteria

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7962..10541
DNA (2580bp) protein (860aa)
Type III restriction protein res subunit {ECO:0000313|EMBL:GAK60895.1}; species="Bacteria.;" source="bacterium UASB270.;"
Putative type III restriction enzyme, res subunit bin=GWC2_CP_Nitrospirae-rel_42_7 species=unknown genus=Acinetobacter taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
type III restriction protein res subunit
PLM3-1_170_b1_sep16_scaffold_3202_9
unknown

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10538..10639
DNA (102bp) protein (34aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_3202_10
RBG_19FT_COMBO_Chloroflexi_49_13_curated, Chloroflexi, Bacteria

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10703..10978
DNA (276bp) protein (92aa)
hypothetical protein bin=RBG_16_Aminicenantes_63_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_63_14 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
AbrB; regulators of stationary/sporulation gene expression
Tax=RBG_19FT_COMBO_Chloroflexi_49_13_curated
PLM3-1_170_b1_sep16_scaffold_3202_11
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

11009..11926
DNA (918bp) protein (306aa)
Hydrolase Tax=Rhodococcus erythropolis CCM2595 RepID=T1VVH7_RHOER
hydrolase
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_170_b1_sep16_scaffold_3202_12
unknown

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comp(12535..12681)
DNA (147bp) protein (49aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_3202_13
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

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12916..14124
DNA (1209bp) protein (403aa)
Uncharacterized protein Tax=Amycolatopsis orientalis HCCB10007 RepID=R4SK19_AMYOR
hypothetical protein
Tax=RBG_16_RIF_CHLX_70_13_curated
PLM3-1_170_b1_sep16_scaffold_3202_14
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

14398..14706
DNA (309bp) protein (103aa)
hypothetical protein Tax=Verrucomicrobium sp. 3C RepID=UPI000367E68F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE67518.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM3-1_170_b1_sep16_scaffold_3202_15
RBG_16_Chloroflexi_64_43_curated, Chloroflexi, Bacteria

Not on your lists

14962..15432
DNA (471bp) protein (157aa)
ATPase Tax=uncultured Chloroflexi bacterium RepID=H5SQ54_9CHLR
ATP-dependent Clp protease ATP-binding subunit ClpC
Tax=RBG_16_Chloroflexi_64_43_curated
PLM3-1_170_b1_sep16_scaffold_3202_16

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15417..15671
DNA (255bp) protein (85aa)
Putative uncharacterized protein Tax=uncultured archaeon RepID=D1JJ34_9ARCH
Marine sediment metagenome DNA, contig: S12H4_S14476 {ECO:0000313|EMBL:GAJ03683.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
PLM3-1_170_b1_sep16_scaffold_3202_17
unknown

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16165..16440
DNA (276bp) protein (92aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_3202_18
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(16303..19293)
DNA (2991bp) protein (997aa)
Uncharacterized protein bin=GWA2_Elusimicrobia_69_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
hypothetical protein
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_3202_19
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(19304..22585)
DNA (3282bp) protein (1094aa)
Uncharacterized protein Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I826_CALAS
hypothetical protein
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_3202_20
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

comp(22591..24966)
DNA (2376bp) protein (792aa)
Uncharacterized protein Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0HZP8_CALAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL98485.1}; species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
PLM3-1_170_b1_sep16_scaffold_3202_21
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(24963..25964)
DNA (1002bp) protein (334aa)
Glycosyl transferase, group 1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UXY1_ROSS1
group 1 glycosyl transferase
Tax=RBG_16_Chloroflexi_63_12_curated
Displaying 21 items

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