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PLM3-1_170_b1_sep16_scaffold_3889

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_3889_1
RBG_16_Chloroflexi_57_9_curated, Chloroflexi, Bacteria

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3..740
DNA (738bp) protein (246aa)
Uncharacterized protein Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I8K1_CALAS
hypothetical protein
Tax=RBG_16_Chloroflexi_57_9_curated
PLM3-1_170_b1_sep16_scaffold_3889_2
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

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737..1252
DNA (516bp) protein (172aa)
Hypothetical membrane protein Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N0M7_ANATU
hypothetical protein
Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
PLM3-1_170_b1_sep16_scaffold_3889_3
Crinalium epipsammum, Crinalium, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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1249..2430
DNA (1182bp) protein (394aa)
RNA 3'-terminal phosphate cyclase (EC:6.5.1.4)
RNA 3'-terminal phosphate cyclase {ECO:0000256|HAMAP-Rule:MF_00200}; Short=RNA cyclase {ECO:0000256|HAMAP-Rule:MF_00200};; Short=RNA-3'-phosphate cyclase {ECO:0000256|HAMAP-Rule:MF_00200};; EC=6.5.1.4 {ECO:0000256|HAMAP-Rule:MF_00200};; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Crinalium.;" source="Crinalium epipsammum PCC 9333.;"
hypothetical protein Tax=Chlorogloeopsis RepID=UPI0002D4B261
PLM3-1_170_b1_sep16_scaffold_3889_4
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

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2442..3371
DNA (930bp) protein (310aa)
rnz; ribonuclease Z (EC:3.1.26.11); K00784 ribonuclease Z [EC:3.1.26.11] bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
rnz; ribonuclease Z (EC:3.1.26.11)
Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
PLM3-1_170_b1_sep16_scaffold_3889_5
Nostoc sp. PCC 7107, Nostoc, Nostocales, Cyanobacteria, Bacteria

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comp(3469..4899)
DNA (1431bp) protein (477aa)
Uncharacterized protein Tax=Nostoc sp. PCC 7107 RepID=K9QF92_9NOSO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY43472.1}; species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc sp. PCC 7107.;"
PLM3-1_170_b1_sep16_scaffold_3889_6
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5009..7324)
DNA (2316bp) protein (772aa)
WD-40 repeat protein Tax=Beggiatoa sp. PS RepID=A7BQ86_9GAMM
WD-40 repeat protein {ECO:0000313|EMBL:EDN71311.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
WD-40 repeat-containing protein
PLM3-1_170_b1_sep16_scaffold_3889_7
RBG_16_Chloroflexi_54_18_curated, Chloroflexi, Bacteria

Not on your lists

comp(7501..8820)
DNA (1320bp) protein (440aa)
WD40 repeat, subgroup Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SAI7_GEOOG
WD40 repeat-containing protein
Tax=RBG_16_Chloroflexi_54_18_curated
PLM3-1_170_b1_sep16_scaffold_3889_8
RBG_16_Chloroflexi_54_18_curated, Chloroflexi, Bacteria

Not on your lists

comp(8817..10880)
DNA (2064bp) protein (688aa)
Putative uncharacterized protein Tax=Oscillochloris trichoides DG-6 RepID=E1IIN5_9CHLR
hypothetical protein
Tax=RBG_16_Chloroflexi_54_18_curated
PLM3-1_170_b1_sep16_scaffold_3889_9
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

Not on your lists

11138..11803
DNA (666bp) protein (222aa)
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8GAZ5_CHLAD
ECF subfamily RNA polymerase sigma-24 subunit
Tax=RBG_13_Chloroflexi_68_17_curated
PLM3-1_170_b1_sep16_scaffold_3889_10
RBG_13_Chloroflexi_66_10_curated, Chloroflexi, Bacteria

Not on your lists

11796..12524
DNA (729bp) protein (243aa)
Putative uncharacterized protein Tax=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) RepID=B9LBU3_CHLSY
hypothetical protein
Tax=RBG_13_Chloroflexi_66_10_curated
PLM3-1_170_b1_sep16_scaffold_3889_11
unknown

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12832..12978
DNA (147bp) protein (49aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_3889_12
RBG_13_Chloroflexi_48_10_curated, Chloroflexi, Bacteria

Not on your lists

comp(13313..14656)
DNA (1344bp) protein (448aa)
peptidase U62 modulator of DNA gyrase bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
peptidase U62 modulator of DNA gyrase
Tax=RBG_13_Chloroflexi_48_10_curated
PLM3-1_170_b1_sep16_scaffold_3889_13
RBG_13_Chloroflexi_48_10_curated, Chloroflexi, Bacteria

Not on your lists

comp(14953..16161)
DNA (1209bp) protein (403aa)
Uncharacterized protein Tax=candidate division ZIXI bacterium RBG-1 RepID=T0L8F3_9BACT
hypothetical protein
Tax=RBG_13_Chloroflexi_48_10_curated
PLM3-1_170_b1_sep16_scaffold_3889_14
unknown

Not on your lists

comp(16865..17185)
DNA (321bp) protein (107aa)

This feature has no annotations

Displaying 14 items

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