ggKbase home page

PLM3-1_170_b1_sep16_scaffold_2526

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_2526_1

Not on your lists

comp(3..770)
DNA (768bp) protein (256aa)
aminotransferase (EC:2.6.1.-)
hypothetical protein Tax=Geopsychrobacter electrodiphilus RepID=UPI00035F8979
4-aminobutyrate aminotransferase family protein {ECO:0000313|EMBL:BAL56916.1}; species="unclassified sequences; environmental samples.;" source="uncultured prokaryote.;"
PLM3-1_170_b1_sep16_scaffold_2526_2
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(829..1800)
DNA (972bp) protein (324aa)
Pyridoxal-5'-phosphate-dependent protein beta subunit Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1CAE1_SPHTD
Pyridoxal-5'-phosphate-dependent protein beta subunit
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_2526_3
Anaerolinea thermophila, Anaerolinea, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(1870..3291)
DNA (1422bp) protein (474aa)
D-hydantoinase (EC:3.5.2.2)
D-hydantoinase {ECO:0000313|EMBL:BAJ62061.1}; EC=3.5.2.2 {ECO:0000313|EMBL:BAJ62061.1};; species="Bacteria; Chloroflexi; Anaerolineae; Anaerolineales; Anaerolineaceae; Anaerolinea.;" source="Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 /; UNI-1).;"
D-hydantoinase Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8MYB6_ANATU
PLM3-1_170_b1_sep16_scaffold_2526_4
CG_Arma_02, Armatimonadetes, Bacteria

Not on your lists

comp(3391..4002)
DNA (612bp) protein (204aa)
hypothetical protein Tax=unclassified candidate division EM 19 RepID=UPI000381FC55
hypothetical protein
Tax=CG_Arma_02
PLM3-1_170_b1_sep16_scaffold_2526_5
RLO_RIF02_62_27, RIF2, Bacteria

Not on your lists

comp(4015..5172)
DNA (1158bp) protein (386aa)
methylenetetrahydromethanopterin reductase (EC:1.5.99.11)
F420-dependent oxidoreductase bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Tax=RIFCSPLOWO2_12_FULL_RIF02_62_27_curated
PLM3-1_170_b1_sep16_scaffold_2526_6
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(5286..6140)
DNA (855bp) protein (285aa)
N-carbamoylputrescine amidase bin=GWC2_Chloroflexi_73_18 species=Ilumatobacter coccineus genus=Ilumatobacter taxon_order=Acidimicrobiales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
aguB; N-carbamoylputrescine amidase
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_2526_7
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(6244..7416)
DNA (1173bp) protein (391aa)
Putative NMT1/THI5-like protein bin=GWC2_Chloroflexi_73_18 species=Ilumatobacter coccineus genus=Ilumatobacter taxon_order=Acidimicrobiales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_2526_8
RBG_16_Actinobacteria_68_21_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(7599..8402)
DNA (804bp) protein (268aa)
binding-protein-dependent transport system inner membrane protein; K02050 NitT/TauT family transport system permease protein bin=bin8_Chloro species=unknown genus=Ruegeria taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin8_Chloro organism_group=Chloroflexi
binding-protein-dependent transport system inner membrane protein
Tax=RBG_16_Actinobacteria_68_21_curated
PLM3-1_170_b1_sep16_scaffold_2526_9
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(8407..9198)
DNA (792bp) protein (264aa)
ABC transporter Tax=Meiothermus timidus RepID=UPI00035C9437
ABC transporter-like protein
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3-1_170_b1_sep16_scaffold_2526_10
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(9220..9426)
DNA (207bp) protein (69aa)
Putative ABC transporter permease protein bin=GWC2_Chloroflexi_73_18 species=Actinoplanes missouriensis genus=Actinoplanes taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Tax=GWC2_RIF_CHLX_73_18_curated
PLM3-1_170_b1_sep16_scaffold_2526_11
RBG_16_Actinobacteria_68_21_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(9446..10432)
DNA (987bp) protein (329aa)
Putative ABC transporter permease protein bin=GWC2_Chloroflexi_73_18 species=Actinoplanes missouriensis genus=Actinoplanes taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
ABC transporter permease
Tax=RBG_16_Actinobacteria_68_21_curated
PLM3-1_170_b1_sep16_scaffold_2526_12
unknown

Not on your lists

comp(10868..10966)
DNA (99bp) protein (33aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_2526_13
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(11077..11238)
DNA (162bp) protein (54aa)
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_2526_14
unknown

Not on your lists

comp(11285..11434)
DNA (150bp) protein (50aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_2526_15
unknown

Not on your lists

11437..12024
DNA (588bp) protein (196aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_2526_16
unknown

Not on your lists

12404..12511
DNA (108bp) protein (36aa)

This feature has no annotations

Displaying 16 items

View Taxonomy