ggKbase home page

PLM3-1_170_b1_sep16_scaffold_2796

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_2796_1
unknown

Not on your lists

comp(3..86)
DNA (84bp) protein (28aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_2796_2
RBG_16_Actinobacteria_67_15_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

275..862
DNA (588bp) protein (196aa)
hypothetical protein Tax=Candidatus Microthrix parvicella RepID=UPI000367298A
hypothetical protein
Tax=RBG_16_Actinobacteria_67_15_curated
PLM3-1_170_b1_sep16_scaffold_2796_3
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

859..1386
DNA (528bp) protein (176aa)
UPI0003CFFDA7 related cluster Tax=unknown RepID=UPI0003CFFDA7
putative integral membrane protein
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_2796_4
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(1805..2020)
DNA (216bp) protein (72aa)
seg bin=bin1_lowGC species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=bin1_lowGC organism_group=Unknown_CP
Tax=CSP1_2_Dadabacteria
PLM3-1_170_b1_sep16_scaffold_2796_5
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(2102..4591)
DNA (2490bp) protein (830aa)
heavy metal translocating P-type ATPase (EC:3.6.3.-)
Heavy metal translocating P-type ATPase bin=GWD2_Chloroflexi_49_16 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_2796_6
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(4661..4870)
DNA (210bp) protein (70aa)
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_2796_7
RIFOXYD12_FULL_Chloroflexi_57_15_curated, Chloroflexi, Bacteria

Not on your lists

comp(4954..5226)
DNA (273bp) protein (91aa)
Putative uncharacterized protein Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N4D1_ANATU
hypothetical protein
Tax=RIFOXYD12_FULL_Chloroflexi_57_15_curated
PLM3-1_170_b1_sep16_scaffold_2796_8
RBG_16_Chloroflexi_54_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(5434..6021)
DNA (588bp) protein (196aa)
Putative uncharacterized protein bin=GWB2_Chloroflexi_54_36 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
hypothetical protein
Tax=RBG_16_Chloroflexi_54_11_curated
PLM3-1_170_b1_sep16_scaffold_2796_9
RBG_16_Chloroflexi_52_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(6091..7152)
DNA (1062bp) protein (354aa)
Putative uncharacterized protein Tax=Anaerolinea thermophila UNI-1 RepID=E8MY14_ANATU bin=RBG9 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
hypothetical protein
Tax=RBG_16_Chloroflexi_52_11_curated
PLM3-1_170_b1_sep16_scaffold_2796_10
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(7218..7790)
DNA (573bp) protein (191aa)
hypothetical protein bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
hypothetical protein
Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
PLM3-1_170_b1_sep16_scaffold_2796_11
RBG_16_Gammaproteobacteria_66_13_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7959..8552
DNA (594bp) protein (198aa)
Protein serine/threonine phosphatase bin=GWB2_Chloroflexi_54_36 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
hypothetical protein
Tax=RBG_16_Gammaproteobacteria_66_13_curated
PLM3-1_170_b1_sep16_scaffold_2796_12
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

Not on your lists

comp(8570..9205)
DNA (636bp) protein (212aa)
Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
PLM3-1_170_b1_sep16_scaffold_2796_13
Anaerolinea thermophila, Anaerolinea, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(9286..10314)
DNA (1029bp) protein (343aa)
tal_pgi; transaldolase/glucose-6-phosphate isomerase (EC:2.2.1.2 5.3.1.9)
Transaldolase {ECO:0000256|SAAS:SAAS00118670}; EC=2.2.1.2 {ECO:0000256|SAAS:SAAS00118670};; species="Bacteria; Chloroflexi; Anaerolineae; Anaerolineales; Anaerolineaceae; Anaerolinea.;" source="Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 /; UNI-1).;"
Transaldolase/glucose-6-phosphate isomerase Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N5W8_ANATU
PLM3-1_170_b1_sep16_scaffold_2796_14
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(10307..10429)
DNA (123bp) protein (41aa)
talA; bifunctional transaldolase/phosoglucose isomerase (EC:2.2.1.2) bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin1_lowGC organism_group=Unknown_CP
Tax=CSP1_2_Dadabacteria
PLM3-1_170_b1_sep16_scaffold_2796_15
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(10548..12719)
DNA (2172bp) protein (724aa)
Transketolase Tax=Burkholderia cenocepacia (strain MC0-3) RepID=B1K1L9_BURCC
transketolase
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_2796_16
GWC2_Chloroflexi_49_37_curated, Chloroflexi, Bacteria

Not on your lists

12771..13217
DNA (447bp) protein (149aa)
Putative small heat shock protein bin=GWD2_Chloroflexi_49_16 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
putative small heat shock protein
Tax=GWC2_Chloroflexi_49_37_curated
PLM3-1_170_b1_sep16_scaffold_2796_17
RBG_13_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

13279..13734
DNA (456bp) protein (152aa)
heat shock protein Hsp20 family protein
Putative small heat shock protein bin=GWD2_Chloroflexi_49_16 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
Tax=RBG_13_Chloroflexi_56_8_curated
PLM3-1_170_b1_sep16_scaffold_2796_18
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

14086..14337
DNA (252bp) protein (84aa)
UPF0332 protein TM_1000 Tax=Thermotoga RepID=YA00_THEMA
hypothetical protein
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_2796_19
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

14339..14707
DNA (369bp) protein (123aa)
DNA polymerase beta domain protein region Tax=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) RepID=B8DYQ8_DICTD
DNA polymerase beta domain-containing protein
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_2796_20
RBG_13_Chloroflexi_66_10_curated, Chloroflexi, Bacteria

Not on your lists

comp(14841..15560)
DNA (720bp) protein (240aa)
Tax=RBG_13_Chloroflexi_66_10_curated
PLM3-1_170_b1_sep16_scaffold_2796_21
RBG_13_Chloroflexi_66_10_curated, Chloroflexi, Bacteria

Not on your lists

comp(15627..16682)
DNA (1056bp) protein (352aa)
Oxidoreductase molybdopterin binding protein Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CEZ6_THET1
oxidoreductase molybdopterin binding protein
Tax=RBG_13_Chloroflexi_66_10_curated
PLM3-1_170_b1_sep16_scaffold_2796_22
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(16985..17473)
DNA (489bp) protein (163aa)
hypothetical protein bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
acetyltransferase, GNAT family
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_2796_23
RBG_13_Chloroflexi_60_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(17487..18356)
DNA (870bp) protein (290aa)
atm:ANT_10620 hypothetical protein; K00974 tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
hypothetical protein
Tax=RBG_13_Chloroflexi_60_9_curated
PLM3-1_170_b1_sep16_scaffold_2796_24
unknown

Not on your lists

18641..18952
DNA (312bp) protein (104aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_2796_25
unknown

Not on your lists

comp(19002..19490)
DNA (489bp) protein (163aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_2796_26
RBG_19FT_COMBO_Chloroflexi_50_10_curated, Chloroflexi, Bacteria

Not on your lists

comp(19504..20556)
DNA (1053bp) protein (351aa)
Electron transfer flavoprotein alpha subunit bin=GWC2_Chloroflexi_49_37 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
etfA; electron transfer flavoprotein subunit alpha
Tax=RBG_19FT_COMBO_Chloroflexi_50_10_curated
PLM3-1_170_b1_sep16_scaffold_2796_27
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(20553..21254)
DNA (702bp) protein (234aa)
electron transfer flavoprotein subunit beta; K03521 electron transfer flavoprotein beta subunit bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
Electron transfer flavoprotein alpha/beta-subunit
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_2796_28
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

Not on your lists

comp(21428..22705)
DNA (1278bp) protein (426aa)
acyl-CoA dehydrogenase (EC:1.3.99.-)
Acyl-CoA dehydrogenase Tax=uncultured bacterium RepID=G3C5S6_9BACT
Tax=RBG_13_Chloroflexi_68_17_curated
PLM3-1_170_b1_sep16_scaffold_2796_29
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

22887..24371
DNA (1485bp) protein (495aa)
hypothetical protein bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
hypothetical protein
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_2796_30
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

24595..25203
DNA (609bp) protein (203aa)
Uncharacterized protein Tax=Smithella sp. ME-1 RepID=V4FIJ6_9DELT
Tax=RBG_16_Chloroflexi_63_12_curated
Displaying 30 items

View Taxonomy