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PLM3-1_170_b1_sep16_scaffold_189

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_189_1
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(2..616)
DNA (615bp) protein (205aa)
Putative 1-aminocyclopropane-1-carboxylate deaminase Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A0C2_9PROT
ACC deaminase/D-cysteine desulfhydrase family
Tax=RBG_16_Chloroflexi_57_11_curated
PLM3-1_170_b1_sep16_scaffold_189_2
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

comp(662..1618)
DNA (957bp) protein (319aa)
Methionyl-tRNA formyltransferase Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I297_CALAS
fmt; methionyl-tRNA formyltransferase
Methionyl-tRNA formyltransferase {ECO:0000313|EMBL:BAL99384.1}; species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
PLM3-1_170_b1_sep16_scaffold_189_3
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

1736..2062
DNA (327bp) protein (109aa)
Probable Fe(2+)-trafficking protein Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CBA5_THET1
Fe(II) trafficking protein YggX
Probable Fe(2+)-trafficking protein {ECO:0000256|HAMAP-Rule:MF_00686, ECO:0000256|SAAS:SAAS00073862}; species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
PLM3-1_170_b1_sep16_scaffold_189_4
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

2059..3438
DNA (1380bp) protein (460aa)
Uncharacterized protein Tax=Nitrolancetus hollandicus Lb RepID=I4EGC9_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:CCF83741.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolancea hollandica Lb.;"
Radical SAM domain-containing protein
PLM3-1_170_b1_sep16_scaffold_189_5
CG_Anaero_04, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(3545..4021)
DNA (477bp) protein (159aa)
hypothetical protein Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI000377682A
hypothetical protein
Tax=CG_Anaero_04
PLM3-1_170_b1_sep16_scaffold_189_6
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(4071..5330)
DNA (1260bp) protein (420aa)
ATP-dependent carboxylate-amine ligase domain protein ATP-grasp Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U6G4_9CHLR
ATP-dependent carboxylate-amine ligase domain protein ATP-grasp {ECO:0000313|EMBL:EFH80575.1}; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
phosphoribosylglycinamide synthetase
PLM3-1_170_b1_sep16_scaffold_189_7
RBG_16_Chloroflexi_54_18_curated, Chloroflexi, Bacteria

Not on your lists

comp(5388..5996)
DNA (609bp) protein (203aa)
Putative uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RBG_16_Chloroflexi_54_18_curated
PLM3-1_170_b1_sep16_scaffold_189_8
RBG_16_Chloroflexi_48_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(5993..6544)
DNA (552bp) protein (184aa)
Tax=RBG_16_Chloroflexi_48_8_curated
PLM3-1_170_b1_sep16_scaffold_189_9
RBG_16_Chloroflexi_57_9_curated, Chloroflexi, Bacteria

Not on your lists

6685..7056
DNA (372bp) protein (124aa)
hypothetical protein bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=bin9_gal15 organism_group=GAL15
Tax=RBG_16_Chloroflexi_57_9_curated
PLM3-1_170_b1_sep16_scaffold_189_10
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

7053..7394
DNA (342bp) protein (114aa)
Tax=CG_Anaero_02
PLM3-1_170_b1_sep16_scaffold_189_11
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(7377..8456)
DNA (1080bp) protein (360aa)
Oxidoreductase domain protein Tax=Roseiflexus sp. (strain RS-1) RepID=A5UVB6_ROSS1
oxidoreductase domain-containing protein
Oxidoreductase domain protein {ECO:0000313|EMBL:ABQ90569.1}; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus sp. (strain RS-1).;"
PLM3-1_170_b1_sep16_scaffold_189_12
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8536..9444)
DNA (909bp) protein (303aa)
Sugar phosphate isomerase Tax=Caldanaerobacter subterraneus subsp. yonseiensis KB-1 RepID=U5CN24_THEYO
Sugar phosphate isomerase {ECO:0000313|EMBL:ERM91393.1}; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaerobacter subterraneus subsp. yonseiensis KB-1.;"
IolE; sugar phosphate isomerase/epimerase
PLM3-1_170_b1_sep16_scaffold_189_13
RBG_16_Chloroflexi_58_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(9525..10487)
DNA (963bp) protein (321aa)
selD; selenide, water dikinase (EC:2.7.9.3)
Selenide, water dikinase bin=GWB2_Chloroflexi_54_36 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
Tax=RBG_16_Chloroflexi_58_14_curated
PLM3-1_170_b1_sep16_scaffold_189_14
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10825..11559)
DNA (735bp) protein (245aa)
Ribose-5-phosphate isomerase A Tax=Oscillochloris trichoides DG-6 RepID=E1ID11_9CHLR
ribose-5-phosphate isomerase A
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM3-1_170_b1_sep16_scaffold_189_15
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(11549..13021)
DNA (1473bp) protein (491aa)
glucose-6-phosphate 1-dehydrogenase (EC:1.1.1.49)
Glucose-6-phosphate 1-dehydrogenase bin=GWC2_Chloroflexi_49_37 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
Tax=BJP_IG2157_Anaerolineales_55_23
PLM3-1_170_b1_sep16_scaffold_189_16
CG_Anaero_03, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(13110..14021)
DNA (912bp) protein (304aa)
Putative hydroxyacid dehydrogenase bin=GWB2_Chloroflexi_49_20 species=mine drainage metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
6-phosphogluconate dehydrogenase, decarboxylating
Tax=CG_Anaero_03
PLM3-1_170_b1_sep16_scaffold_189_17
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(14058..14840)
DNA (783bp) protein (261aa)
Putative phosphatase/phosphohexomutase bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=bin1_lowGC organism_group=Unknown_CP
HAD-superfamily hydrolase
Tax=CG_Anaero_02
PLM3-1_170_b1_sep16_scaffold_189_18
unknown

Not on your lists

15091..16110
DNA (1020bp) protein (340aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_189_19
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

Not on your lists

comp(16166..17989)
DNA (1824bp) protein (608aa)
Phosphoglucose isomerase
Transaldolase bin=GWF2_Melioribacter_38_21 species=uncultured bacterium W5-47b genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
PLM3-1_170_b1_sep16_scaffold_189_20
CSP1_8_Deltaproteobacteria, 43F-1404R, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18165..18497
DNA (333bp) protein (111aa)
XRE family transcriptional regulator bin=bin5_DeltaP species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin5_DeltaP organism_group=Deltaproteobacteria
helix-turn-helix domain protein
Tax=CSP1_8_Deltaproteobacteria
PLM3-1_170_b1_sep16_scaffold_189_21

Not on your lists

comp(18584..18829)
DNA (246bp) protein (82aa)
Marine sediment metagenome DNA, contig: S06H3_S09809 {ECO:0000313|EMBL:GAI45957.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PLM3-1_170_b1_sep16_scaffold_189_22
CG_Proteo_01, Proteobacteria, Bacteria

Not on your lists

comp(18952..19539)
DNA (588bp) protein (196aa)
hypothetical protein Tax=Nodosilinea nodulosa RepID=UPI0002D9DA3F
hypothetical protein
Tax=CG_Proteo_01
PLM3-1_170_b1_sep16_scaffold_189_23
RBG_13_Planctomycetes_62_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(19695..20954)
DNA (1260bp) protein (420aa)
Uncharacterized protein Tax=Petrotoga mobilis (strain DSM 10674 / SJ95) RepID=A9BJW5_PETMO
hypothetical protein
Tax=RBG_13_Planctomycetes_62_9_curated
PLM3-1_170_b1_sep16_scaffold_189_24
Isosphaera pallida, Isosphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(21017..23311)
DNA (2295bp) protein (765aa)
glycogen branching protein (EC:2.4.1.18)
1,4-alpha-glucan branching enzyme GlgB {ECO:0000256|HAMAP-Rule:MF_00685}; EC=2.4.1.18 {ECO:0000256|HAMAP-Rule:MF_00685};; 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase {ECO:0000256|HAMAP-Rule:MF_00685}; Alpha-(1->4)-glucan branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; Glycogen branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; Flags: Precursor;; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B).;"
1,4-alpha-glucan branching enzyme GlgB Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8R3Y6_ISOPI
PLM3-1_170_b1_sep16_scaffold_189_25
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(23389..24870)
DNA (1482bp) protein (494aa)
UniRef90_H5SMU8 Hypothetical conserved protein Tax=uncultured Chloroflexi bacterium RepID=H5SMU8_9CHLR bin=RBG9 species=uncultured Chloroflexi bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
hypothetical protein
Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
PLM3-1_170_b1_sep16_scaffold_189_26
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24969..25325)
DNA (357bp) protein (119aa)
Anti-sigma factor antagonist Tax=Azospirillum sp. (strain B510) RepID=D3NVH8_AZOS1
anti-anti-sigma regulatory factor
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
PLM3-1_170_b1_sep16_scaffold_189_27
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(25491..25712)
DNA (222bp) protein (74aa)
transmembrane_regions 54..72 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_189_28
RBG_19FT_COMBO_Chloroflexi_56_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(25889..26809)
DNA (921bp) protein (307aa)
peptidase C60 family protein; K07284 sortase A [EC:3.4.22.70] bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
peptidase C60 family protein
Tax=RBG_19FT_COMBO_Chloroflexi_56_12_curated
PLM3-1_170_b1_sep16_scaffold_189_29
Peptococcaceae bacterium SCADC1_2_3, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26814..27236)
DNA (423bp) protein (141aa)
Uncharacterized protein {ECO:0000313|EMBL:KFD41474.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium SCADC1_2_3.;"
PLM3-1_170_b1_sep16_scaffold_189_30
RLO_PLX_64_10, Bacteria

Not on your lists

comp(27233..27769)
DNA (537bp) protein (179aa)
DNA polymerase, beta domain protein region bin=GWA2_Elusimicrobia_69_24 species=Thermoproteus uzoniensis genus=Thermoproteus taxon_order=Thermoproteales taxon_class=Thermoprotei phylum=Crenarchaeota tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
DNA polymerase beta domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
Displaying items 1-30 of 40 in total

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