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PLM3-1_170_b1_sep16_scaffold_408

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_408_1
Thermus thermophilus, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

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comp(2..661)
DNA (660bp) protein (220aa)
hypothetical protein Tax=Aminicenantes bacterium SCGC AAA252-N07 RepID=UPI0003617C8C
integrase catalytic subunit
Integrase catalytic region {ECO:0000313|EMBL:AEG34373.1}; species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus.;" source="Thermus thermophilus (strain SG0.5JP17-16).;"
PLM3-1_170_b1_sep16_scaffold_408_2

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comp(658..936)
DNA (279bp) protein (93aa)
hypothetical protein Tax=Aminicenantes bacterium SCGC AAA252-F08 RepID=UPI0003B453A7
Marine sediment metagenome DNA, contig: S01H1_S30589 {ECO:0000313|EMBL:GAG31844.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
transposase IS3/IS911 family protein
PLM3-1_170_b1_sep16_scaffold_408_3
[Oscillatoria] sp. PCC 6506, Kamptonema, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(1083..1526)
DNA (444bp) protein (148aa)
Putative uncharacterized protein Tax=Oscillatoria sp. PCC 6506 RepID=D8FXL0_9CYAN
Putative uncharacterized protein {ECO:0000313|EMBL:CBN55100.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Kamptonema.;" source="[Oscillatoria] sp. PCC 6506.;"
hypothetical protein
PLM3-1_170_b1_sep16_scaffold_408_4
Anaerolinea thermophila, Anaerolinea, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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comp(1751..4609)
DNA (2859bp) protein (953aa)
dnaE; DNA polymerase III subunit alpha (EC:2.7.7.7)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; species="Bacteria; Chloroflexi; Anaerolineae; Anaerolineales; Anaerolineaceae; Anaerolinea.;" source="Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 /; UNI-1).;"
DNA polymerase III alpha subunit Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8MZ74_ANATU
PLM3-1_170_b1_sep16_scaffold_408_5
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5100..5345
DNA (246bp) protein (82aa)
Transposase and inactivated derivatives-like protein Tax=Methylobacterium extorquens (strain PA1) RepID=A9W875_METEP
transposase and inactivated derivatives-like protein
Transposase and inactivated derivatives-like protein {ECO:0000313|EMBL:ABY32073.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens (strain PA1).;"
PLM3-1_170_b1_sep16_scaffold_408_6
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5491..8301)
DNA (2811bp) protein (937aa)
hypothetical protein Tax=Desulfobacter curvatus RepID=UPI000370732B
Uncharacterized protein {ECO:0000313|EMBL:ETW99863.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
signal transduction protein
PLM3-1_170_b1_sep16_scaffold_408_7
Chloroflexus aggregans, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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9247..9852
DNA (606bp) protein (202aa)
aldehyde dehydrogenase (EC:1.2.1.3)
Aldehyde dehydrogenase (NAD(+)) {ECO:0000313|EMBL:ACL25105.1}; EC=1.2.1.3 {ECO:0000313|EMBL:ACL25105.1};; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" source="Chloroflexus aggregans (strain MD-66 / DSM 9485).;"
Aldehyde dehydrogenase (NAD(+)) Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8GD38_CHLAD
PLM3-1_170_b1_sep16_scaffold_408_8
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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10072..10443
DNA (372bp) protein (124aa)
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_408_9
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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10440..11696
DNA (1257bp) protein (419aa)
cap:CLDAP_05420 gabT; 4-aminobutyrate aminotransferase; K00823 4-aminobutyrate aminotransferase [EC:2.6.1.19] bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
gabT; 4-aminobutyrate aminotransferase
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_408_10
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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11693..12709
DNA (1017bp) protein (339aa)
sppA; signal peptide peptidase SppA (EC:3.4.21.-)
Signal peptide peptidase SppA Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LCI6_THEPS
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_408_11
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

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12987..14246
DNA (1260bp) protein (420aa)
cyb:CYB_1464 polyamine/opine/phosphonate ABC transporter periplasmic substrate-binding protein; K02055 putative spermidine/putrescine transport system substrate-binding protein bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
polyamine/opine/phosphonate ABC transporter periplasmic substrate-binding protein
Tax=RBG_16_Chloroflexi_57_11_curated
PLM3-1_170_b1_sep16_scaffold_408_12
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

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14354..15481
DNA (1128bp) protein (376aa)
spermidine/putrescine ABC transporter ATPase; K02052 putative spermidine/putrescine transport system ATP-binding protein bin=RBG_19FT_COMBO_GAL15_69_19 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
spermidine/putrescine ABC transporter ATPase
Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
PLM3-1_170_b1_sep16_scaffold_408_13
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

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15514..16479
DNA (966bp) protein (322aa)
binding-protein-dependent transport system inner membrane protein; K02054 putative spermidine/putrescine transport system permease protein bin=RBG_19FT_COMBO_GAL15_69_19 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
binding-protein-dependent transport system inner membrane protein
Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
PLM3-1_170_b1_sep16_scaffold_408_14
unknown

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16469..16612
DNA (144bp) protein (48aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_408_15
RBG_16_Chloroflexi_58_14_curated, Chloroflexi, Bacteria

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16691..17542
DNA (852bp) protein (284aa)
cap:CLDAP_19350 ABC transporter permease; K02053 putative spermidine/putrescine transport system permease protein bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
binding-protein-dependent transport system inner membrane protein
Tax=RBG_16_Chloroflexi_58_14_curated
PLM3-1_170_b1_sep16_scaffold_408_16
Synechococcus sp. JA-2-3B'a(2-13), Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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17752..19194
DNA (1443bp) protein (481aa)
Aldehyde dehydrogenase family protein Tax=Synechococcus sp. (strain JA-2-3B'a(2-13)) RepID=Q2JNG7_SYNJB
gamma-aminobutyraldehyde dehydrogenase
Aldehyde dehydrogenase family protein {ECO:0000313|EMBL:ABD01699.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. (strain JA-2-3B'a(2-13)) (Cyanobacteria bacterium; Yellowstone B-Prime).;"
PLM3-1_170_b1_sep16_scaffold_408_17
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

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19484..21388
DNA (1905bp) protein (635aa)
Aldehyde:ferredoxin oxidoreductase bin=GWD2_Chloroflexi_49_16 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
aldehyde:ferredoxin oxidoreductase
Tax=RBG_13_Chloroflexi_68_17_curated
PLM3-1_170_b1_sep16_scaffold_408_18
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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21403..21972
DNA (570bp) protein (190aa)
Putative uncharacterized protein Tax=Roseiflexus sp. (strain RS-1) RepID=A5UW79_ROSS1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ90882.1}; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus sp. (strain RS-1).;"
PLM3-1_170_b1_sep16_scaffold_408_19

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21986..23158
DNA (1173bp) protein (391aa)
Hypothetical conserved protein Tax=uncultured prokaryote RepID=H5SIQ6_9ZZZZ
Hypothetical conserved protein {ECO:0000313|EMBL:BAL56042.1}; species="unclassified sequences; environmental samples.;" source="uncultured prokaryote.;"
hypothetical protein
PLM3-1_170_b1_sep16_scaffold_408_20
RBG_16_Chloroflexi_52_11_curated, Chloroflexi, Bacteria

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23405..24730
DNA (1326bp) protein (442aa)
cap:CLDAP_37580 hemL; glutamate-1-semialdehyde 2,1-aminomutase; K01845 glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
hemL; glutamate-1-semialdehyde 2,1-aminomutase
Tax=RBG_16_Chloroflexi_52_11_curated
PLM3-1_170_b1_sep16_scaffold_408_21
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

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24792..26024
DNA (1233bp) protein (411aa)
saccharopine dehydrogenase bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
saccharopine dehydrogenase
Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
PLM3-1_170_b1_sep16_scaffold_408_22
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

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comp(26104..29655)
DNA (3552bp) protein (1184aa)
serine/threonine protein kinase bin=bin9_gal15 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=bin9_gal15 organism_group=GAL15
serine/threonine protein kinase
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_170_b1_sep16_scaffold_408_23
Enhygromyxa salina, Enhygromyxa, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(29732..31435)
DNA (1704bp) protein (568aa)
prolyl oligopeptidase (EC:3.4.21.26)
Prolyl endopeptidase {ECO:0000313|EMBL:KIG13378.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Enhygromyxa.;" source="Enhygromyxa salina.;"
Prolyl oligopeptidase bin=GWD2_Chloroflexi_49_16 species=Meiothermus silvanus genus=Meiothermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
Displaying 23 items

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