ggKbase home page

PLM3-1_170_b1_sep16_scaffold_494

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_494_1
Paenibacillus barengoltzii, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

255..1493
DNA (1239bp) protein (413aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus barengoltzii G22.;"
hypothetical protein Tax=Deinococcus apachensis RepID=UPI00037D8B1C
3-oxoacyl-ACP synthase
PLM3-1_170_b1_sep16_scaffold_494_2
unknown

Not on your lists

1483..1944
DNA (462bp) protein (154aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_494_3
unknown

Not on your lists

2004..2339
DNA (336bp) protein (112aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_494_4
Desulfovibrio vulgaris, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2414..3277
DNA (864bp) protein (288aa)
DNA-cytosine methyltransferase (EC:2.1.1.37)
Cytosine-specific methyltransferase {ECO:0000256|RuleBase:RU000417}; EC=2.1.1.37 {ECO:0000256|RuleBase:RU000417};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio vulgaris (strain RCH1).;"
Cytosine-specific methyltransferase Tax=Desulfovibrio vulgaris RepID=E3INB8_DESVR
PLM3-1_170_b1_sep16_scaffold_494_5

Not on your lists

3370..4038
DNA (669bp) protein (223aa)
Uncharacterized protein Tax=Thermococcus sp. CL1 RepID=I3ZUA0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:KKN39011.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
PLM3-1_170_b1_sep16_scaffold_494_6
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

4063..5421
DNA (1359bp) protein (453aa)
Glucose-methanol-choline oxidoreductase Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FN73_DESAA
glucose-methanol-choline oxidoreductase
Tax=RBG_16_Chloroflexi_57_11_curated
PLM3-1_170_b1_sep16_scaffold_494_7
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

Not on your lists

comp(5618..6616)
DNA (999bp) protein (333aa)
cap:CLDAP_06250 putative major facilitator superfamily transporter bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
putative major facilitator superfamily transporter
Tax=RBG_13_Chloroflexi_68_17_curated
PLM3-1_170_b1_sep16_scaffold_494_8
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

Not on your lists

6730..7800
DNA (1071bp) protein (357aa)
Uncharacterized protein Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U556_9CHLR
hypothetical protein
Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
PLM3-1_170_b1_sep16_scaffold_494_9
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

8453..9829
DNA (1377bp) protein (459aa)
Radical SAM domain protein Tax=Pedosphaera parvula Ellin514 RepID=B9XDZ3_9BACT
hypothetical protein
Tax=BJP_IG2157_Anaerolineales_55_23
PLM3-1_170_b1_sep16_scaffold_494_10
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10064..10720
DNA (657bp) protein (219aa)
Uncharacterized protein {ECO:0000313|EMBL:KEO90022.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter litoralis.;"
PLM3-1_170_b1_sep16_scaffold_494_11
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

10736..12115
DNA (1380bp) protein (460aa)
Radical SAM domain protein Tax=Pedosphaera parvula Ellin514 RepID=B9XDZ4_9BACT
BchE/P-methylase family protein
Tax=BJP_IG2157_Anaerolineales_55_23
PLM3-1_170_b1_sep16_scaffold_494_12
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

12096..13220
DNA (1125bp) protein (375aa)
Putative uncharacterized protein bin=GWA2__Bacteriovorax-rel_49_15 species=Kingella oralis genus=Kingella taxon_order=Neisseriales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2__Bacteriovorax-rel_49_15 organism_group=Deltaproteobacteria
hypothetical protein
Tax=BJP_IG2157_Anaerolineales_55_23
PLM3-1_170_b1_sep16_scaffold_494_13
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

13217..14308
DNA (1092bp) protein (364aa)
Radical SAM domain protein Tax=Desulfovibrio hydrothermalis AM13 = DSM 14728 RepID=L0RGK5_9DELT
Radical SAM domain protein
Tax=BJP_IG2157_Anaerolineales_55_23
PLM3-1_170_b1_sep16_scaffold_494_14
unknown

Not on your lists

14335..15006
DNA (672bp) protein (224aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_494_15
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

15020..15994
DNA (975bp) protein (325aa)
Rieske (2Fe-2S) domain protein Tax=Pedosphaera parvula Ellin514 RepID=B9XDZ0_9BACT
Rieske (2Fe-2S) domain protein {ECO:0000313|EMBL:EEF61881.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
kshA; Rieske family iron-sulfur cluster-binding protein
PLM3-1_170_b1_sep16_scaffold_494_16
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

16091..16291
DNA (201bp) protein (67aa)
Tax=BJP_IG2157_Anaerolineales_55_23
PLM3-1_170_b1_sep16_scaffold_494_17
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

16426..16716
DNA (291bp) protein (97aa)
Tax=BJP_IG2157_Anaerolineales_55_23
PLM3-1_170_b1_sep16_scaffold_494_18
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

16783..17493
DNA (711bp) protein (237aa)
Uncharacterized protein Tax=Geitlerinema sp. PCC 7407 RepID=K9S901_9CYAN
hypothetical protein
Tax=BJP_IG2157_Anaerolineales_55_23
PLM3-1_170_b1_sep16_scaffold_494_19
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

17490..19142
DNA (1653bp) protein (551aa)
GH3 auxin-responsive promoter Tax=Chthoniobacter flavus Ellin428 RepID=B4CXF0_9BACT
GH3 auxin-responsive promoter
Tax=BJP_IG2157_Anaerolineales_55_23
PLM3-1_170_b1_sep16_scaffold_494_20
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

Not on your lists

19192..20523
DNA (1332bp) protein (444aa)
Radical SAM domain protein Tax=Pedosphaera parvula Ellin514 RepID=B9XDZ4_9BACT
BchE/P-methylase family protein
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
PLM3-1_170_b1_sep16_scaffold_494_21
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20844..21701)
DNA (858bp) protein (286aa)
Integrase, catalytic region Tax=Acaryochloris marina (strain MBIC 11017) RepID=B0BYN1_ACAM1
Integrase, catalytic region {ECO:0000313|EMBL:CDH44515.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
integrase catalytic subunit
PLM3-1_170_b1_sep16_scaffold_494_22
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21840..22763)
DNA (924bp) protein (308aa)
chalcone synthase Tax=Saccharopolyspora spinosa RepID=UPI000237AD0A
type III polyketide synthase
Type III polyketide synthase {ECO:0000313|EMBL:AGL21351.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
PLM3-1_170_b1_sep16_scaffold_494_23
Pseudanabaena biceps, Pseudanabaena, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(23063..23815)
DNA (753bp) protein (251aa)
Glucose-inhibited division protein A Tax=Pseudanabaena biceps PCC 7429 RepID=L8N672_9CYAN
Glucose-inhibited division protein A {ECO:0000313|EMBL:ELS34205.1}; Flags: Precursor;; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Pseudanabaena.;" source="Pseudanabaena biceps PCC 7429.;"
FAD dependent oxidoreductase
Displaying 23 items

View Taxonomy