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PLM3-1_170_b1_sep16_scaffold_524

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_524_1
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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comp(2..1405)
DNA (1404bp) protein (468aa)
atm:ANT_14870 glyA_gcvT; serine hydroxymethyltransferase / aminomethyltransferase (EC:2.1.2.10 2.1.2.1); K00600 glycine hydroxymethyltransferase [EC:2.1.2.1] bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
glyA_gcvT; serine hydroxymethyltransferase / aminomethyltransferase (EC:2.1.2.10 2.1.2.1)
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_524_2
Microcoleus vaginatus, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

1472..2074
DNA (603bp) protein (201aa)
Uncharacterized protein Tax=Microcoleus vaginatus FGP-2 RepID=F5UFM7_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:EGK88879.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus vaginatus FGP-2.;"
transpanse
PLM3-1_170_b1_sep16_scaffold_524_3
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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2179..2712
DNA (534bp) protein (178aa)
ThiJ/PfpI Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AWP2_RUBXD
ThiJ/PfpI
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_524_4
GWB2_Chloroflexi_54_36_curated, Chloroflexi, Bacteria

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2795..4192
DNA (1398bp) protein (466aa)
Uncharacterized protein Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TPG3_METAC
hypothetical protein
Tax=GWB2_Chloroflexi_54_36_curated
PLM3-1_170_b1_sep16_scaffold_524_trna_1
unknown

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comp(4402..4475)
DNA (74bp)
transferRNA Val
PLM3-1_170_b1_sep16_scaffold_524_5
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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4774..6531
DNA (1758bp) protein (586aa)
ABC transporter related Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) PF2_ROSCS">RepID=A7NPF2_ROSCS
ABC transporter-like protein
ABC transporter related {ECO:0000313|EMBL:ABU59448.1}; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus castenholzii (strain DSM 13941 / HLO8).;"
PLM3-1_170_b1_sep16_scaffold_524_6
RBG_19FT_COMBO_Chloroflexi_56_12_curated, Chloroflexi, Bacteria

Not on your lists

6655..7452
DNA (798bp) protein (266aa)
atm:ANT_13710 fumarylacetoacetate hydrolase family protein bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
fumarylacetoacetate hydrolase family protein
Tax=RBG_19FT_COMBO_Chloroflexi_56_12_curated
PLM3-1_170_b1_sep16_scaffold_524_7
CG_Anaero_01, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

7531..8085
DNA (555bp) protein (185aa)
dcd; deoxycytidine triphosphate deaminase (EC:3.5.4.13)
Deoxycytidine triphosphate deaminase Tax=uncultured Chloroflexi bacterium RepID=H5SLA3_9CHLR
Tax=CG_Anaero_01
PLM3-1_170_b1_sep16_scaffold_524_8
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

8186..9328
DNA (1143bp) protein (381aa)
hypothetical protein Tax=candidate division NC10 bacterium UW 659-1-D11 RepID=UPI00037B73C0
hypothetical protein
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_524_9
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(9406..10311)
DNA (906bp) protein (302aa)
Homoserine kinase Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=G6I345_9FIRM bin=RBG9 species=Desulfotomaculum gibsoniae genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG9 organism_group=Chloroflexi
homoserine kinase
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_524_10
Vibrio campbellii, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10466..10894)
DNA (429bp) protein (143aa)
hypothetical protein Tax=Aminicenantes bacterium SCGC AAA252-F08 RepID=UPI00036AED21
Uncharacterized protein {ECO:0000313|EMBL:KGR32560.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio campbellii.;"
PLM3-1_170_b1_sep16_scaffold_524_11

Not on your lists

comp(11108..11614)
DNA (507bp) protein (169aa)
Marine sediment metagenome DNA, contig: S06H3_C00802 {ECO:0000313|EMBL:GAI02164.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
PLM3-1_170_b1_sep16_scaffold_524_12
RIFOXYD1_FULL_OD1_36_11_curated, Parcubacteria, Bacteria

Not on your lists

comp(11892..12767)
DNA (876bp) protein (292aa)
id=2076481 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
Tax=RIFOXYD1_FULL_OD1_36_11_curated
PLM3-1_170_b1_sep16_scaffold_524_13
unknown

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comp(12868..13560)
DNA (693bp) protein (231aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_524_14
GWB2_Chloroflexi_54_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(13845..14354)
DNA (510bp) protein (170aa)
thrC; threonine synthase (EC:4.2.3.1)
Threonine synthase bin=GWB2_Chloroflexi_54_36 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
Tax=GWB2_Chloroflexi_54_36_curated
PLM3-1_170_b1_sep16_scaffold_524_15
unknown

Not on your lists

14407..14598
DNA (192bp) protein (64aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_524_16
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

14543..14881
DNA (339bp) protein (113aa)
Integrase, catalytic region bin=GWD2_Desulfuromonadales_54_10 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria
Integrase, catalytic region
Tax=RBG_16_Chloroflexi_56_8_curated
PLM3-1_170_b1_sep16_scaffold_524_17
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

14830..15135
DNA (306bp) protein (102aa)
hypothetical protein Tax=Nodosilinea nodulosa RepID=UPI00037D985E
integrase catalytic subunit
Tax=RBG_16_Chloroflexi_56_8_curated
PLM3-1_170_b1_sep16_scaffold_524_18
unknown

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comp(15782..16741)
DNA (960bp) protein (320aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_524_19
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(17041..18090)
DNA (1050bp) protein (350aa)
atm:ANT_04920 thrC; threonine synthase (EC:4.2.3.1); K01733 threonine synthase [EC:4.2.3.1] bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
thrC; threonine synthase (EC:4.2.3.1)
Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
PLM3-1_170_b1_sep16_scaffold_524_20
unknown

Not on your lists

18454..19221
DNA (768bp) protein (256aa)
Uncharacterized protein Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1CA27_SPHTD
hypothetical protein
PLM3-1_170_b1_sep16_scaffold_524_21
RBG_16_Chloroflexi_48_8_curated, Chloroflexi, Bacteria

Not on your lists

19337..20722
DNA (1386bp) protein (462aa)
atm:ANT_04410 hypothetical protein bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
hypothetical protein
Tax=RBG_16_Chloroflexi_48_8_curated
Displaying 22 items

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