ggKbase home page

PLM3-1_170_b1_sep16_scaffold_551

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_551_1

Not on your lists

2..736
DNA (735bp) protein (245aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2E792_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE01874.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
putative Phosphoribulokinase/uridine kinase
PLM3-1_170_b1_sep16_scaffold_551_2
Geobacter sp. OR-1, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

754..2400
DNA (1647bp) protein (549aa)
Dolichyl-phosphate-mannose-protein mannosyltransferase {ECO:0000313|EMBL:GAM11409.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. OR-1.;"
PLM3-1_170_b1_sep16_scaffold_551_3
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

2609..3823
DNA (1215bp) protein (405aa)
Uncharacterized protein Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FNX7_STIAD
Uncharacterized protein {ECO:0000313|EMBL:ABJ87543.1}; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
hypothetical protein
PLM3-1_170_b1_sep16_scaffold_551_4
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

3895..4680
DNA (786bp) protein (262aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003764531
Phytanoyl-CoA dioxygenase {ECO:0000313|EMBL:EDY17580.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
phytanoyl-CoA dioxygenase
PLM3-1_170_b1_sep16_scaffold_551_5
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

4748..5785
DNA (1038bp) protein (346aa)
Hpr(Ser) kinase/phosphatase Tax=Xanthomonas sp. M97 RepID=UPI0003A8F573
serine kinase of the HPr protein, regulates carbohydrate metabolism
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
PLM3-1_170_b1_sep16_scaffold_551_6
Coleofasciculus chthonoplastes, Coleofasciculus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

5776..6675
DNA (900bp) protein (300aa)
Glycosyl transferase, group 2 family protein Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4VKX5_9CYAN
Glycosyl transferase, group 2 family protein {ECO:0000313|EMBL:EDX77221.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Coleofasciculus.;" source="Coleofasciculus chthonoplastes PCC 7420.;"
putative glycosyltransferase
PLM3-1_170_b1_sep16_scaffold_551_7
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

6672..8213
DNA (1542bp) protein (514aa)
Glycosyl transferase, family 39 Tax=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) RepID=A3CVJ8_METMJ
glycosyl transferase family protein
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_551_8
Myxococcus xanthus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8229..8867)
DNA (639bp) protein (213aa)
hypothetical protein Tax=Myxococcus xanthus RepID=UPI0003043D45
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF92091.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus xanthus (strain DK 1622).;"
PLM3-1_170_b1_sep16_scaffold_551_9
RBG_16_Chloroflexi_64_43_curated, Chloroflexi, Bacteria

Not on your lists

comp(8887..11469)
DNA (2583bp) protein (861aa)
ribonucleotide reductase (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8MYN8_ANATU
Tax=RBG_16_Chloroflexi_64_43_curated
PLM3-1_170_b1_sep16_scaffold_551_10
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(11579..12028)
DNA (450bp) protein (150aa)
nrdR; transcriptional repressor NrdR; K07738 transcriptional repressor NrdR bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
nrdR; transcriptional repressor NrdR
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_551_11
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(12436..13575)
DNA (1140bp) protein (380aa)
atm:ANT_23460 ftsZ; cell division protein FtsZ; K03531 cell division protein FtsZ bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
ftsZ; cell division protein FtsZ
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_551_12
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(13658..14932)
DNA (1275bp) protein (425aa)
Cell division protein ftsA Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8MYN5_ANATU
ftsA; cell division protein FtsA
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_551_13
unknown

Not on your lists

comp(14905..15090)
DNA (186bp) protein (62aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_551_14
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(15101..16039)
DNA (939bp) protein (313aa)
ftsQ; putative cell division protein FtsQ; K03589 cell division protein FtsQ bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
cell division septal protein
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_551_15
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(16036..17169)
DNA (1134bp) protein (378aa)
ddl; D-alanine--D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8MYN3_ANATU
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_551_16
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

Not on your lists

comp(17213..18118)
DNA (906bp) protein (302aa)
murB; UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8MYN2_ANATU
Tax=RBG_13_Chloroflexi_68_17_curated
PLM3-1_170_b1_sep16_scaffold_551_17
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(18108..19046)
DNA (939bp) protein (313aa)
atm:ANT_23400 murC; UDP-N-acetylmuramate--L-alanine ligase (EC:6.3.2.8); K01924 UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
murC; UDP-N-acetylmuramate--L-alanine ligase (EC:6.3.2.8)
Tax=RBG_16_Chloroflexi_63_12_curated
Displaying 17 items

View Taxonomy