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PLM3-1_170_b1_sep16_scaffold_716

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_716_1
Rhodopirellula europaea, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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1..246
DNA (246bp) protein (82aa)
Uncharacterized protein Tax=Rhodopirellula europaea 6C RepID=M2AYK2_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:EMB15054.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula europaea 6C.;"
hypothetical protein
PLM3-1_170_b1_sep16_scaffold_716_2
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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455..1570
DNA (1116bp) protein (372aa)
Glycine oxidase ThiO Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UAZ7_MYXSD
Glycine oxidase ThiO {ECO:0000313|EMBL:KFE69554.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
glycine oxidase ThiO
PLM3-1_170_b1_sep16_scaffold_716_3

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1590..2732
DNA (1143bp) protein (381aa)
Creatinine amidohydrolase {ECO:0000313|EMBL:AGC72704.1}; EC=3.5.2.10 {ECO:0000313|EMBL:AGC72704.1};; species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_2111.;"
Creatinine amidohydrolase Tax=uncultured bacterium A1Q1_fos_2111 RepID=L7VYE2_9BACT
amidase
PLM3-1_170_b1_sep16_scaffold_716_4
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

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2832..3233
DNA (402bp) protein (134aa)
Putative uncharacterized protein bin=GWC2_Chloroflexi_49_37 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
hypothetical protein
Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
PLM3-1_170_b1_sep16_scaffold_716_5
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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3230..4789
DNA (1560bp) protein (520aa)
5'-nucleotidase Tax=Desmospora sp. 8437 RepID=F5SJX5_9BACL
yunD; putative metallophosphoesterase YunD
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_716_6
unknown

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4776..4973
DNA (198bp) protein (66aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_716_7
Kosmotoga olearia, Kosmotoga, Kosmotogales, Thermotogae, Thermotogae, Bacteria

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comp(4954..6090)
DNA (1137bp) protein (379aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; species="Bacteria; Thermotogae; Kosmotogales; Kosmotogaceae; Kosmotoga.;" source="Kosmotoga olearia (strain TBF 19.5.1).;"
Histidine kinase Tax=Kosmotoga olearia (strain TBF 19.5.1) RepID=C5CEM4_KOSOT
histidine kinase
PLM3-1_170_b1_sep16_scaffold_716_8
Desulfosporosinus orientis, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6083..6778)
DNA (696bp) protein (232aa)
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain Tax=Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 / VKM B-1628) RepID=G7WDD3_DESOD
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain {ECO:0000313|EMBL:AET67902.1}; Flags: Precursor;; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 /; VKM B-1628) (Desulfotomaculum orientis).;"
PLM3-1_170_b1_sep16_scaffold_716_9
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

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comp(6792..7124)
DNA (333bp) protein (111aa)
Tax=RBG_16_Chloroflexi_56_8_curated
PLM3-1_170_b1_sep16_scaffold_716_10
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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7160..8020
DNA (861bp) protein (287aa)
3-hydroxybutyryl-CoA dehydrogenase (EC:1.1.1.157)
3-hydroxyacyl-CoA dehydrogenase bin=GWA2_Ignavibacteria_55_11 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_716_11
RBG_19FT_COMBO_Chloroflexi_56_12_curated, Chloroflexi, Bacteria

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8428..10455
DNA (2028bp) protein (676aa)
hypothetical protein, partial Tax=Gemmata obscuriglobus RepID=UPI00016C493E
alkaline phosphatase
Tax=RBG_19FT_COMBO_Chloroflexi_56_12_curated
PLM3-1_170_b1_sep16_scaffold_716_12

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comp(10614..11021)
DNA (408bp) protein (136aa)
Putative uncharacterized protein Tax=uncultured archaeon RepID=D1JI62_9ARCH
Putative uncharacterized protein {ECO:0000313|EMBL:CBH38220.1}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
type I restriction-modification system methyltransferase subunit
PLM3-1_170_b1_sep16_scaffold_716_13
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(10985..13339)
DNA (2355bp) protein (785aa)
Putative DNA methylase bin=GWC2_Chloroflexi_49_37 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
type IV restriction endonuclease
Tax=RBG_16_Chloroflexi_57_11_curated
PLM3-1_170_b1_sep16_scaffold_716_14
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

Not on your lists

13540..14067
DNA (528bp) protein (176aa)
Putative uncharacterized protein bin=GWB2_Chloroflexi_54_36 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
hypothetical protein
Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
PLM3-1_170_b1_sep16_scaffold_716_15
RBG_13_Chloroflexi_66_10_curated, Chloroflexi, Bacteria

Not on your lists

14019..16181
DNA (2163bp) protein (721aa)
Cytochrome c-type biogenesis protein CcmF bin=GWB2_Chloroflexi_54_36 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
ccmF; cytochrome c-type biogenesis protein CcmF
Tax=RBG_13_Chloroflexi_66_10_curated
PLM3-1_170_b1_sep16_scaffold_716_16
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(16317..16715)
DNA (399bp) protein (133aa)
Lactoylglutathione lyase-like lyase Tax=Mycobacterium chubuense NBB4 RepID=I4BKD0_9MYCO bin=RBG9 species=Mycobacterium chubuense genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG9 organism_group=Chloroflexi
lactoylglutathione lyase-like lyase
Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
PLM3-1_170_b1_sep16_scaffold_716_17
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(16722..17102)
DNA (381bp) protein (127aa)
Transcriptional regulator, AraC type Tax=Plesiocystis pacifica SIR-1 RepID=A6GAG6_9DELT bin=RBG9 species=Plesiocystis pacifica genus=Plesiocystis taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG9 organism_group=Chloroflexi
transcription activator effector-binding protein
Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
PLM3-1_170_b1_sep16_scaffold_716_18
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

17145..17630
DNA (486bp) protein (162aa)
ccmH; cytochrome c-type biogenesis protein CcmH; K02200 cytochrome c-type biogenesis protein CcmH bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
ccmH; cytochrome c-type biogenesis protein CcmH
Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
PLM3-1_170_b1_sep16_scaffold_716_19
RBG_16_Chloroflexi_64_43_curated, Chloroflexi, Bacteria

Not on your lists

17734..18282
DNA (549bp) protein (183aa)
Cytochrome C biogenesis protein Tax=uncultured bacterium RepID=B6EWV3_9BACT bin=RBG9 species=uncultured bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG9 organism_group=Chloroflexi
resA; cytochrome c biogenesis protein
Tax=RBG_16_Chloroflexi_64_43_curated
PLM3-1_170_b1_sep16_scaffold_716_20
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

18469..18714
DNA (246bp) protein (82aa)
hypothetical protein Tax=Fischerella muscicola RepID=UPI0002F388CC
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
PLM3-1_170_b1_sep16_scaffold_716_21
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

Not on your lists

18788..19339
DNA (552bp) protein (184aa)
Putative uncharacterized protein bin=GWB2_Chloroflexi_54_36 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
hypothetical protein
Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
PLM3-1_170_b1_sep16_scaffold_716_22
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

Not on your lists

19336..21216
DNA (1881bp) protein (627aa)
atm:ANT_19420 cytochrome c family protein bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
cytochrome c family protein
Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
PLM3-1_170_b1_sep16_scaffold_716_23
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

Not on your lists

21295..21909
DNA (615bp) protein (205aa)
ccmA; heme exporter protein CcmA; K09687 antibiotic transport system ATP-binding protein bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
ccmA; heme exporter protein CcmA
Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
Displaying 23 items

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