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PLM3-1_170_b1_sep16_scaffold_932

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_932_1
RBG_19FT_COMBO_Chloroflexi_56_12_curated, Chloroflexi, Bacteria

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comp(118..1653)
DNA (1536bp) protein (512aa)
seg 60..75 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
Tax=RBG_19FT_COMBO_Chloroflexi_56_12_curated
PLM3-1_170_b1_sep16_scaffold_932_2
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

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1764..3404
DNA (1641bp) protein (547aa)
ABC transporter related protein Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TD75_9CHLR
ABC transporter-like protein
Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
PLM3-1_170_b1_sep16_scaffold_932_3
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

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comp(3431..4237)
DNA (807bp) protein (269aa)
transmembrane_regions 50..72 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
Tax=RBG_16_Chloroflexi_56_8_curated
PLM3-1_170_b1_sep16_scaffold_932_4
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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comp(4234..4824)
DNA (591bp) protein (197aa)
ECF subfamily RNA polymerase sigma-24 factor bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
ECF subfamily RNA polymerase sigma-24 factor
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_932_5
Candidatus Brocadia sinica, Candidatus Brocadia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

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comp(4920..5216)
DNA (297bp) protein (99aa)
Uncharacterized protein Tax=Serratia sp. M24T3 RepID=I0QX51_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:GAN32331.1}; species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Brocadia.;" source="Candidatus Brocadia sinica JPN1.;"
hypothetical protein
PLM3-1_170_b1_sep16_scaffold_932_6
R_Gammaproteobacteria_41_15, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5230..5433)
DNA (204bp) protein (68aa)
Uncharacterized protein Tax=Pontibacter sp. BAB1700 RepID=J0LPX2_9BACT
Hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_41_15_curated
PLM3-1_170_b1_sep16_scaffold_932_7
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

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comp(5461..6648)
DNA (1188bp) protein (396aa)
Peptidase M24 family protein Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I0A5_CALAS
peptidase M24 family protein
Peptidase M24 family protein {ECO:0000313|EMBL:BAL98692.1}; species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
PLM3-1_170_b1_sep16_scaffold_932_8
RBG_16_Chloroflexi_58_14_curated, Chloroflexi, Bacteria

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comp(6645..10289)
DNA (3645bp) protein (1215aa)
Multi-sensor signal transduction histidine kinase bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
diguanylate cyclase
Tax=RBG_16_Chloroflexi_58_14_curated
PLM3-1_170_b1_sep16_scaffold_932_9
RBG_13_Chloroflexi_50_21_curated, Chloroflexi, Bacteria

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10424..11923
DNA (1500bp) protein (500aa)
putative aminopeptidase (EC:3.4.11.-)
Putative aminopeptidase Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N0E1_ANATU
Tax=RBG_13_Chloroflexi_50_21_curated
PLM3-1_170_b1_sep16_scaffold_932_10
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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12174..13451
DNA (1278bp) protein (426aa)
Peptidase T {ECO:0000256|SAAS:SAAS00064331}; EC=3.-.-.- {ECO:0000256|SAAS:SAAS00279025};; EC=3.4.11.- {ECO:0000256|SAAS:SAAS00275860};; EC=3.4.11.4 {ECO:0000256|SAAS:SAAS00064282};; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Peptidase T Tax=Pedosphaera parvula Ellin514 RepID=B9XS94_9BACT
pepT; peptidase T
PLM3-1_170_b1_sep16_scaffold_932_11
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

13462..14121
DNA (660bp) protein (220aa)
Lipase/esterase Tax=uncultured sludge bacterium RepID=E0WCJ2_9BACT
serine esterase
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_932_12
RBG_16_Chloroflexi_64_43_curated, Chloroflexi, Bacteria

Not on your lists

comp(14134..14952)
DNA (819bp) protein (273aa)
tatC; Sec-independent protein translocase protein TatC; K03118 sec-independent protein translocase protein TatC bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
tatC; Sec-independent protein translocase protein TatC
Tax=RBG_16_Chloroflexi_64_43_curated
PLM3-1_170_b1_sep16_scaffold_932_13
unknown

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comp(14989..15336)
DNA (348bp) protein (116aa)

This feature has no annotations

Displaying 13 items

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