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PLM3-1_170_b1_sep16_scaffold_981

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_981_1
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(3..2663)
DNA (2661bp) protein (887aa)
Sensory box histidine kinase/response regulator Tax=Myxococcus RepID=Q1D9Y6_MYXXD bin=RBG9 species=unknown genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG9 organism_group=Chloroflexi
multi-sensor signal transduction histidine kinase
Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
PLM3-1_170_b1_sep16_scaffold_981_2
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(2639..4213)
DNA (1575bp) protein (525aa)
Sensory box histidine kinase/response regulator Tax=Myxococcus RepID=Q1D9Y6_MYXXD bin=RBG9 species=unknown genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG9 organism_group=Chloroflexi
hypothetical protein
Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
PLM3-1_170_b1_sep16_scaffold_981_3
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(4229..6022)
DNA (1794bp) protein (598aa)
major facilitator superfamily protein bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
major facilitator superfamily protein
Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
PLM3-1_170_b1_sep16_scaffold_981_4
unknown

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6220..6423
DNA (204bp) protein (68aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_981_5
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6532..7833)
DNA (1302bp) protein (434aa)
Secreted protein Tax=Beggiatoa sp. PS RepID=A7BVY6_9GAMM
Secreted protein {ECO:0000313|EMBL:EDN69296.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
secreted protein
PLM3-1_170_b1_sep16_scaffold_981_6

Not on your lists

comp(7913..8416)
DNA (504bp) protein (168aa)
Uncharacterized protein Tax=Sorangium cellulosum So0157-2 RepID=S4XLT9_SORCE
Acetyltransferase (GNAT) family {ECO:0000313|EMBL:AIA11500.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
PLM3-1_170_b1_sep16_scaffold_981_7
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

Not on your lists

comp(8438..10108)
DNA (1671bp) protein (557aa)
Putative transcriptional regulator Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I6V7_CALAS
putative transcriptional regulator
Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
PLM3-1_170_b1_sep16_scaffold_981_8
unknown

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10446..10646
DNA (201bp) protein (67aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_981_9
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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10643..12316
DNA (1674bp) protein (558aa)
ilvD; dihydroxy-acid dehydratase (DAD) (EC:4.2.1.9) bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
ilvD; dihydroxy-acid dehydratase (EC:4.2.1.9)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3-1_170_b1_sep16_scaffold_981_10
CSP1_5_NC10, NC10, Bacteria

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12358..14118
DNA (1761bp) protein (587aa)
thiamine pyrophosphate-dependent enzyme, possible carboligase or decarboxylase bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin3_NC10 organism_group=NC10
thiamine pyrophosphate-dependent enzyme, possible carboligase or decarboxylase
Tax=CSP1_5_NC10
PLM3-1_170_b1_sep16_scaffold_981_11
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

14170..15192
DNA (1023bp) protein (341aa)
scl:sce3732 ilvC; ketol-acid reductoisomerase (EC:1.1.1.86); K00053 ketol-acid reductoisomerase [EC:1.1.1.86] bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
ilvC; ketol-acid reductoisomerase (EC:1.1.1.86)
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_981_12
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

15257..16894
DNA (1638bp) protein (546aa)
leuA; 2-isopropylmalate synthase (EC:2.3.3.13)
2-isopropylmalate synthase Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N028_ANATU
Tax=RBG_16_Chloroflexi_57_11_curated
PLM3-1_170_b1_sep16_scaffold_981_13
unknown

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comp(16870..17271)
DNA (402bp) protein (134aa)
hypothetical protein Tax=Kocuria atrinae RepID=UPI000360A3EA
PLM3-1_170_b1_sep16_scaffold_981_14
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

17579..18205
DNA (627bp) protein (209aa)
leuC; 3-isopropylmalate dehydratase large subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase large subunit bin=GWC2_Ignavibacteria_56_12 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_981_15
CG_Anaero_03, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

18211..18831
DNA (621bp) protein (207aa)
leuD; 3-isopropylmalate dehydratase small subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase small subunit bin=GWC2_Chloroflexi_49_37 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
Tax=CG_Anaero_03
PLM3-1_170_b1_sep16_scaffold_981_16
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

18785..20107
DNA (1323bp) protein (441aa)
2-isopropylmalate synthase/homocitrate synthase family protein Tax=Anaeromyxobacter sp. (strain K) RepID=B4UML4_ANASK
alpha-isopropylmalate/homocitrate synthase family transferase
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_981_17
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

20079..20279
DNA (201bp) protein (67aa)
2-isopropylmalate synthase/homocitrate synthase family protein bin=GWC2_Chloroflexi_49_37 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
putative alpha-isopropylmalate/homocitrate synthase family transferase
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_981_18
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20282..21424
DNA (1143bp) protein (381aa)
3-isopropylmalate dehydrogenase Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HB61_ANADF
3-isopropylmalate dehydrogenase
Tax=RBG_16_Anaeromyxobacter_69_14_curated
PLM3-1_170_b1_sep16_scaffold_981_19
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

21400..22353
DNA (954bp) protein (318aa)
ilvE; branched-chain amino acid aminotransferase I (EC:2.6.1.42)
Branched-chain amino acid aminotransferase bin=GWC2_Ignavibacteria_56_12 species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_981_20
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

22425..23249
DNA (825bp) protein (275aa)
prephenate dehydratase (EC:4.2.1.51)
Prephenate dehydratase Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N035_ANATU
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_981_21
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(23374..24426)
DNA (1053bp) protein (351aa)
lysK; acetyl-lysine deacetylase (EC:3.5.1.-)
Acetyl-lysine deacetylase Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N4A7_ANATU
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_981_22
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(24475..25662)
DNA (1188bp) protein (396aa)
argD; acetylornithine aminotransferase (EC:2.6.1.11)
Acetylornithine aminotransferase Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N4A8_ANATU
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_981_23
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(25659..26468)
DNA (810bp) protein (270aa)
argB; acetylglutamate kinase (EC:2.7.2.8)
Acetylglutamate kinase Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N4A9_ANATU
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_981_24
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(26574..27611)
DNA (1038bp) protein (346aa)
argC; N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38)
N-acetyl-gamma-glutamyl-phosphate reductase Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N4B0_ANATU
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3-1_170_b1_sep16_scaffold_981_25
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(27608..28039)
DNA (432bp) protein (144aa)
Lysine biosynthesis protein LysX Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0HZT7_CALAS
lysX; lysine biosynthesis protein LysX
Tax=BJP_IG2157_Anaerolineales_55_23
Displaying 25 items

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