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PLM3-1_170_b1_sep16_scaffold_985

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_985_1
Methanosarcina vacuolata, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

113..1804
DNA (1692bp) protein (564aa)
Uncharacterized protein Tax=Pseudomonas aeruginosa BWHPSA026 RepID=U8N9I5_PSEAI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKB45264.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina vacuolata Z-761.;"
PLM3-1_170_b1_sep16_scaffold_985_2
CG_Anaero_04, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists


comp(1824..4859)
DNA (3036bp) protein (1012aa)
valS; valyl-tRNA synthetase (EC:6.1.1.9)
Valine--tRNA ligase bin=GWD2_Chloroflexi_49_16 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
Tax=CG_Anaero_04
PLM3-1_170_b1_sep16_scaffold_985_3
RBG_19FT_COMBO_Chloroflexi_49_13_curated, Chloroflexi, Bacteria

Not on your lists

comp(5326..6366)
DNA (1041bp) protein (347aa)
hypothetical protein Tax=Azoarcus toluclasticus RepID=UPI0003656D61
Tax=RBG_19FT_COMBO_Chloroflexi_49_13_curated
PLM3-1_170_b1_sep16_scaffold_985_4
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6347..6865)
DNA (519bp) protein (173aa)
Uncharacterized protein Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JQM4_HALVA
Uncharacterized protein {ECO:0000313|EMBL:EMA11432.1}; species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC 29715.;"
hypothetical protein
PLM3-1_170_b1_sep16_scaffold_985_5
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6881..7348)
DNA (468bp) protein (156aa)
Uncharacterized protein Tax=Halogranum salarium B-1 RepID=J2ZG02_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN59625.1}; species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
PLM3-1_170_b1_sep16_scaffold_985_6
RBG_13_Chloroflexi_50_21_curated, Chloroflexi, Bacteria

Not on your lists

comp(7358..7651)
DNA (294bp) protein (98aa)
hypothetical protein bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
hypothetical protein
Tax=RBG_13_Chloroflexi_50_21_curated
PLM3-1_170_b1_sep16_scaffold_985_7
S_OP1_64_32, KB1, Bacteria

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comp(7697..8371)
DNA (675bp) protein (225aa)
Hypothetical conserved protein Tax=uncultured candidate division OP1 bacterium RepID=H5SJI0_9BACT
hypothetical protein
Tax=S_OP1_64_32
PLM3-1_170_b1_sep16_scaffold_985_8
Alishewanella agri, Alishewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8472..9035)
DNA (564bp) protein (188aa)
hypothetical protein Tax=Rheinheimera perlucida RepID=UPI00036919D6
Uncharacterized protein {ECO:0000313|EMBL:EIW87940.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Alishewanella.;" source="Alishewanella agri BL06.;"
hypothetical protein
PLM3-1_170_b1_sep16_scaffold_985_9
RBG_16_Chloroflexi_47_49_curated, Chloroflexi, Bacteria

Not on your lists

comp(9556..9759)
DNA (204bp) protein (68aa)
hypothetical protein Tax=Zavarzinella formosa RepID=UPI0002EC2C20
hypothetical protein
Tax=RBG_16_Chloroflexi_47_49_curated
PLM3-1_170_b1_sep16_scaffold_985_10
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(9892..11175)
DNA (1284bp) protein (428aa)
Peptidase S8 and S53 subtilisin kexin sedolisin Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6S8R7_INTC7
peptidase S8 and S53 subtilisin kexin sedolisin
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
PLM3-1_170_b1_sep16_scaffold_985_11
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(11796..12179)
DNA (384bp) protein (128aa)
Glyoxalase/bleomycin resistance protein/dioxygenase Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AWF8_HERA2
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ABX06717.1}; species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785).;"
PLM3-1_170_b1_sep16_scaffold_985_12
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(12407..15367)
DNA (2961bp) protein (987aa)
acs; acetate--CoA ligase; K01895 acetyl-CoA synthetase [EC:6.2.1.1] bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
acs; acetate--CoA ligase
Tax=RBG_16_Chloroflexi_57_11_curated
PLM3-1_170_b1_sep16_scaffold_985_13
RBG_16_Chloroflexi_57_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(15364..15741)
DNA (378bp) protein (126aa)
Uncharacterized protein Tax=Leptolyngbya sp. Heron Island J RepID=U9VZ53_9CYAN
hypothetical protein
Tax=RBG_16_Chloroflexi_57_9_curated
PLM3-1_170_b1_sep16_scaffold_985_14
RBG_16_Chloroflexi_57_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(15738..16097)
DNA (360bp) protein (120aa)
Hypothetical conserved protein Tax=uncultured candidate division OP1 bacterium RepID=H5SJH9_9BACT
protein of unknown function DUF433
Tax=RBG_16_Chloroflexi_57_9_curated
PLM3-1_170_b1_sep16_scaffold_985_15
Parcubacteria bacterium GW2011_GWF1_52_5, Parcubacteria, Bacteria

Not on your lists

comp(16150..16581)
DNA (432bp) protein (144aa)
Uncharacterized protein {ECO:0000313|EMBL:KKW26628.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF1_52_5.;"
PLM3-1_170_b1_sep16_scaffold_985_16
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(16729..17184)
DNA (456bp) protein (152aa)
hypothetical protein bin=bin9_gal15 species=Chloroflexus aggregans genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin9_gal15 organism_group=GAL15
hypothetical protein
Tax=CSP1_3_Armatimonadetes
PLM3-1_170_b1_sep16_scaffold_985_17
unknown

Not on your lists

comp(17239..17646)
DNA (408bp) protein (136aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_985_18
Nocardia brasiliensis, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17696..18310
DNA (615bp) protein (205aa)
Uncharacterized protein Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2BEV8_STRRD
Uncharacterized protein {ECO:0000313|EMBL:GAJ81464.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia brasiliensis NBRC 14402.;"
hypothetical protein
PLM3-1_170_b1_sep16_scaffold_985_19
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

Not on your lists

comp(18385..19107)
DNA (723bp) protein (241aa)
transmembrane_regions 23..40 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
Tax=RBG_13_Chloroflexi_68_17_curated
PLM3-1_170_b1_sep16_scaffold_985_20
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(19167..19856)
DNA (690bp) protein (230aa)
Putative uncharacterized protein Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CGU6_DESK7
hypothetical protein
Tax=CG_Anaero_02
PLM3-1_170_b1_sep16_scaffold_985_21
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(19979..20341)
DNA (363bp) protein (121aa)
hypothetical protein bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
hypothetical protein
Tax=RBG_16_Spirochaete_67_19_curated
PLM3-1_170_b1_sep16_scaffold_985_22
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(20459..20743)
DNA (285bp) protein (95aa)
Cyclase/dehydrase Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D369_METSW
hypothetical protein
Tax=RBG_16_Archaea_50_20_curated
PLM3-1_170_b1_sep16_scaffold_985_23

Not on your lists

comp(20954..21172)
DNA (219bp) protein (73aa)
hypothetical protein Tax=Streptomyces RepID=UPI0003728A2B
Uncharacterized protein {ECO:0000313|EMBL:KKK82902.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
Displaying 23 items

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