ggKbase home page

PLM3-1_170_b1_sep16_scaffold_16424

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_16424_1
unknown

Not on your lists

108..206
DNA (99bp) protein (33aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_16424_2
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(260..778)
DNA (519bp) protein (173aa)
ATP-dependent Clp protease ATP-binding subunit ClpX Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AGB7_IGNAJ
clpX; ATP-dependent protease Clp ATPase subunit
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b1_sep16_scaffold_16424_3
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(717..1490)
DNA (774bp) protein (258aa)
ATP-dependent Clp protease ATP-binding subunit ClpX bin=GWF2_Ignavibacteria_35_20 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
clpX; ATP-dependent protease Clp ATPase subunit
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b1_sep16_scaffold_16424_4
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(1491..3338)
DNA (1848bp) protein (616aa)
Uncharacterized protein bin=GWF2_Ignavibacteria_35_20 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
hypothetical protein
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b1_sep16_scaffold_16424_5
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(3456..3821)
DNA (366bp) protein (122aa)
TonB-like protein Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AKR3_IGNAJ
TonB-like protein
TonB-like protein {ECO:0000313|EMBL:AFH49570.1}; species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
PLM3-1_170_b1_sep16_scaffold_16424_6
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(3987..4226)
DNA (240bp) protein (80aa)
TonB-like protein Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AKR3_IGNAJ
TonB-like protein
TonB-like protein {ECO:0000313|EMBL:AFH49570.1}; species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
PLM3-1_170_b1_sep16_scaffold_16424_7
RIFOXYD12_FULL_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(4219..4707)
DNA (489bp) protein (163aa)
TonB-like protein bin=GWF2_Ignavibacteria_35_20 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
Tax=RIFOXYD12_FULL_Ignavibacteria_36_8_curated
PLM3-1_170_b1_sep16_scaffold_16424_8
RIFOXYD12_FULL_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(4715..5023)
DNA (309bp) protein (103aa)
id=3737524 bin=GWF2_Ignavibacteria_35_20 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
Tax=RIFOXYD12_FULL_Ignavibacteria_36_8_curated
PLM3-1_170_b1_sep16_scaffold_16424_9
RBG_13_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(5202..5741)
DNA (540bp) protein (180aa)
RNA polymerase sigma factor bin=GWF2_Melioribacter_38_21 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
sigma-70 family RNA polymerase sigma factor
Tax=RBG_13_Ignavibacteria_36_8_curated
Displaying 9 items

View Taxonomy