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PLM3-1_170_b1_sep16_scaffold_6263

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_6263_1
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(2..1354)
DNA (1353bp) protein (451aa)
Uncharacterized protein bin=GWF2_Ignavibacteria_35_20 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
hypothetical protein
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b1_sep16_scaffold_6263_2
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(1367..2944)
DNA (1578bp) protein (526aa)
id=3588141 bin=GWF2_Ignavibacteria_35_20 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b1_sep16_scaffold_6263_3
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(2959..3312)
DNA (354bp) protein (118aa)
Putative uncharacterized protein bin=GWF2_Ignavibacteria_35_20 species=uncultured marine microorganism HF4000_ANIW141I9 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
hypothetical protein
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b1_sep16_scaffold_6263_4
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(3889..4215)
DNA (327bp) protein (109aa)
Uncharacterized protein bin=GWF2_Ignavibacteria_35_20 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
hypothetical protein
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b1_sep16_scaffold_6263_5
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(4221..4583)
DNA (363bp) protein (121aa)
ial:IALB_0786 TPR repeat protein bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
hypothetical protein
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b1_sep16_scaffold_6263_6
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(4570..5157)
DNA (588bp) protein (196aa)
TPR repeat protein Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AHP1_IGNAJ
hypothetical protein
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b1_sep16_scaffold_6263_7
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

5538..6440
DNA (903bp) protein (301aa)
Adenosine deaminase bin=GWF2_Ignavibacteria_35_20 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
add; adenosine deaminase
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b1_sep16_scaffold_6263_8
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

6415..6750
DNA (336bp) protein (112aa)
hypothetical protein bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
hypothetical protein
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b1_sep16_scaffold_6263_9
RIFOXYA2_FULL_Ignavibacteria_37_17_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

6753..7688
DNA (936bp) protein (312aa)
Urocanate hydratase Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AHN8_IGNAJ
hutU; urocanate hydratase
Tax=RIFOXYA2_FULL_Ignavibacteria_37_17_curated
PLM3-1_170_b1_sep16_scaffold_6263_10
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

7991..8185
DNA (195bp) protein (65aa)
Urocanate hydratase bin=GWC2_Ignavibacteria_56_12 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
hutU; urocanate hydratase
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b1_sep16_scaffold_6263_11
RIFOXYA2_FULL_Ignavibacteria_37_17_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

8284..9483
DNA (1200bp) protein (400aa)
Phosphoglycerate dehydrogenase-like protein bin=GWC2_Ignavibacteria_38_9 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
phosphoglycerate dehydrogenase-like protein
Tax=RIFOXYA2_FULL_Ignavibacteria_37_17_curated
PLM3-1_170_b1_sep16_scaffold_6263_12
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(9484..10242)
DNA (759bp) protein (253aa)
Uncharacterized protein bin=GWF2_Ignavibacteria_35_20 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
hypothetical protein
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b1_sep16_scaffold_6263_13
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists


comp(10349..10690)
DNA (342bp) protein (114aa)
rplS; 50S ribosomal protein L19; K02884 large subunit ribosomal protein L19 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
rplS; 50S ribosomal protein L19
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b1_sep16_scaffold_6263_14
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(10702..11385)
DNA (684bp) protein (228aa)
tRNA (guanine-N(1)-)-methyltransferase bin=GWF2_Ignavibacteria_35_20 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
trmD; tRNA-(guanine-N1)-methyltransferase
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b1_sep16_scaffold_6263_15
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(11366..11884)
DNA (519bp) protein (173aa)
Ribosome maturation factor RimM bin=GWF2_Ignavibacteria_35_20 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
rimM; 16S rRNA processing RimM protein
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b1_sep16_scaffold_6263_16
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(11906..12139)
DNA (234bp) protein (78aa)
nucleic acid binding protein
Putative KH domain RNA-binding protein; K06960 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b1_sep16_scaffold_6263_17
RIFOXYA2_FULL_Ignavibacteria_37_17_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists


comp(12221..12694)
DNA (474bp) protein (158aa)
30S ribosomal protein S16 bin=GWF2_Ignavibacteria_35_20 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
rpsP; 30S ribosomal protein S16
Tax=RIFOXYA2_FULL_Ignavibacteria_37_17_curated
PLM3-1_170_b1_sep16_scaffold_6263_18
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists


comp(12720..13919)
DNA (1200bp) protein (400aa)
Signal recognition particle protein Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AHM9_IGNAJ
ffh; Signal recognition particle subunit SRP54
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b1_sep16_scaffold_6263_19
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(13979..14854)
DNA (876bp) protein (292aa)
ATP synthase gamma chain bin=GWF2_Ignavibacteria_35_20 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
atpG; F0F1-type ATP synthase subunit gamma
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b1_sep16_scaffold_6263_20
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(14861..15571)
DNA (711bp) protein (237aa)
ATP synthase subunit alpha Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AHM7_IGNAJ
atpA; F0F1 ATP synthase subunit alpha
Tax=RBG_16_Ignavibacteria_34_14_curated
Displaying 20 items

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