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PLM3-1_170_b1_sep16_scaffold_3846

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_3846_1
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(30..755)
DNA (726bp) protein (242aa)
tRNA pseudouridine synthase A bin=GWF2_Ignavibacteria_35_20 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
truA; Pseudouridylate synthase A
Tax=GWC2_Ignavibacteria_rel_36_12_curated
PLM3-1_170_b1_sep16_scaffold_3846_2
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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1145..3823
DNA (2679bp) protein (893aa)
ial:IALB_2245 NarL family signal transduction histidine kinase bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
NarL family signal transduction histidine kinase
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b1_sep16_scaffold_3846_3
RLO_RIF02_62_27, RIF2, Bacteria

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3854..4417
DNA (564bp) protein (188aa)
hypothetical protein Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B56D91
transposase mutator type
Tax=RIFCSPLOWO2_12_FULL_RIF02_62_27_curated
PLM3-1_170_b1_sep16_scaffold_3846_4
RBG_13_Planctomycetes_63_9_curated, Planctomycetia, Planctomycetes, Bacteria

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comp(4483..5022)
DNA (540bp) protein (180aa)
Glycosyl transferase family 2 Tax=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) RepID=F0SL85_PLABD
family 2 glycosyl transferase
Tax=RBG_13_Planctomycetes_63_9_curated
PLM3-1_170_b1_sep16_scaffold_3846_5
Candidatus Omnitrophus sp. SKK-01, Candidatus Omnitrophus, Omnitrophica, Bacteria

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comp(5210..6907)
DNA (1698bp) protein (566aa)
Glycosyl transferase family 39 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NRG7_ROSCS
Family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase {ECO:0000313|EMBL:KJJ85196.1}; species="Bacteria; Omnitrophica; Candidatus Omnitrophus.;" source="Candidatus Omnitrophus sp. SKK-01.;"
glycosyl transferase family protein
PLM3-1_170_b1_sep16_scaffold_3846_6
unknown

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comp(6852..6992)
DNA (141bp) protein (47aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_3846_7
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(7347..7874)
DNA (528bp) protein (176aa)
hypothetical protein Tax=Cloacimonetes bacterium SCGC AAA252-O17 RepID=UPI000378A1CD
putative lipoprotein
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b1_sep16_scaffold_3846_8
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(8047..9411)
DNA (1365bp) protein (455aa)
ial:IALB_2246 gabD; NAD-dependent succinate-semialdehyde dehydrogenase; K00135 succinate-semialdehyde dehydrogenase (NADP+) [EC:1.2.1.16] bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
gabD; NAD-dependent succinate-semialdehyde dehydrogenase
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b1_sep16_scaffold_3846_9
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(9596..10828)
DNA (1233bp) protein (411aa)
Serine phosphatase RsbU bin=GWF2_Ignavibacteria_35_20 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
Serine phosphatase RsbU
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b1_sep16_scaffold_3846_10
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(10828..12027)
DNA (1200bp) protein (400aa)
Uncharacterized protein Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0ANE8_IGNAJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFH50505.1}; species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
PLM3-1_170_b1_sep16_scaffold_3846_11
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(12030..12716)
DNA (687bp) protein (229aa)
ial:IALB_2248 hypothetical protein bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
hypothetical protein
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b1_sep16_scaffold_3846_12
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(12673..13311)
DNA (639bp) protein (213aa)
Uncharacterized protein bin=GWF2_Ignavibacteria_35_20 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
hypothetical protein
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b1_sep16_scaffold_3846_13
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(13417..13626)
DNA (210bp) protein (70aa)
Orotate phosphoribosyltransferase bin=GWF2_Ignavibacteria_35_20 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
pyrE; orotate phosphoribosyltransferase
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_170_b1_sep16_scaffold_3846_14
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(13783..13947)
DNA (165bp) protein (55aa)
pyrE; orotate phosphoribosyltransferase; K00762 orotate phosphoribosyltransferase [EC:2.4.2.10] bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
pyrE; orotate phosphoribosyltransferase
Tax=RBG_16_Ignavibacteria_34_14_curated
Displaying 14 items

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