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PLM3-1_170_b1_sep16_scaffold_2951

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_2951_1
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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159..1844
DNA (1686bp) protein (562aa)
Acyl-CoA carboxylase component bin=GWF2_Ignavibacteria_35_20 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
acyl-CoA carboxylase component
Tax=GWC2_Ignavibacteria_rel_36_12_curated
PLM3-1_170_b1_sep16_scaffold_2951_2
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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2026..2538
DNA (513bp) protein (171aa)
Uncharacterized protein bin=GWF2_Ignavibacteria_35_20 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
hypothetical protein
Tax=GWC2_Ignavibacteria_rel_36_12_curated
PLM3-1_170_b1_sep16_scaffold_2951_3
unknown

Not on your lists

comp(2545..2970)
DNA (426bp) protein (142aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_2951_4
GWB2_Ignavibacteria_35_6b_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(3596..3883)
DNA (288bp) protein (96aa)
Putative uncharacterized protein bin=GWF2_Ignavibacteria_35_20 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
hypothetical protein
Tax=GWB2_Ignavibacteria_35_6b_curated
PLM3-1_170_b1_sep16_scaffold_2951_5
CG_Ignavi_02, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(3938..4363)
DNA (426bp) protein (142aa)
Tax=CG_Ignavi_02
PLM3-1_170_b1_sep16_scaffold_2951_6
BJP_IG2102_Ignavibacteriales_35_8, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(4452..5681)
DNA (1230bp) protein (410aa)
ial:IALB_0560 pilQ; Type IV pilus assembly protein PilQ bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
pilQ; type IV pilus assembly protein PilQ
Tax=BJP_IG2102_Ignavibacteriales_35_8
PLM3-1_170_b1_sep16_scaffold_2951_7
RBG_16_Ignavibacteria_36_9_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(5682..6575)
DNA (894bp) protein (298aa)
ial:IALB_0559 hypothetical protein bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
hypothetical protein
Tax=RBG_16_Ignavibacteria_36_9_curated
PLM3-1_170_b1_sep16_scaffold_2951_8
CG_Ignavi_02, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(6559..8067)
DNA (1509bp) protein (503aa)
ial:IALB_0558 fimbrial assembly family protein bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
fimbrial assembly family protein
Tax=CG_Ignavi_02
PLM3-1_170_b1_sep16_scaffold_2951_9
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(8070..9362)
DNA (1293bp) protein (431aa)
Twitching motility protein PilT Tax=Melioribacter roseus P3M RepID=I6ZP75_MELRP bin=RAAC39 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
Twitching motility protein PilT
Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
PLM3-1_170_b1_sep16_scaffold_2951_10
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(9381..11210)
DNA (1830bp) protein (610aa)
Type IV pilus assembly protein PilB Tax=Melioribacter roseus (strain P3M) RepID=I6Z3W6_MELRP
Type IV pilus assembly protein PilB
Tax=GWC2_Ignavibacteria_rel_36_12_curated
PLM3-1_170_b1_sep16_scaffold_2951_11
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(11378..12571)
DNA (1194bp) protein (398aa)
Type IV pilus assembly protein PilC Tax=Melioribacter roseus P3M RepID=I7A1H5_MELRP bin=RAAC39 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
pilC; type IV pilus assembly protein PilC
Type IV pilus assembly protein PilC {ECO:0000313|EMBL:AFH48267.1}; species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
PLM3-1_170_b1_sep16_scaffold_2951_12
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(12591..12983)
DNA (393bp) protein (131aa)
Uncharacterized protein Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AH09_IGNAJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFH48266.1}; species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
PLM3-1_170_b1_sep16_scaffold_2951_13
GWB2_Ignavibacteria_35_6b_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(13374..14696)
DNA (1323bp) protein (441aa)
Uncharacterized protein bin=GWF2_Ignavibacteria_35_20 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
hypothetical protein
Tax=GWB2_Ignavibacteria_35_6b_curated
PLM3-1_170_b1_sep16_scaffold_2951_14
GWB2_Ignavibacteria_35_6b_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(14707..15309)
DNA (603bp) protein (201aa)
Uncharacterized protein bin=GWF2_Ignavibacteria_35_20 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
hypothetical protein
Tax=GWB2_Ignavibacteria_35_6b_curated
PLM3-1_170_b1_sep16_scaffold_2951_15
RBG_13_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(15322..15777)
DNA (456bp) protein (152aa)
Uncharacterized protein Tax=Melioribacter roseus (strain P3M) RepID=I6ZPG7_MELRP
hypothetical protein
Tax=RBG_13_Ignavibacteria_36_8_curated
Displaying 15 items

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