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PLM3-1_170_b1_sep16_scaffold_32313

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_32313_1
Candidatus Nitrosopumilus koreensis, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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2..364
DNA (363bp) protein (121aa)
Peptidase M20 Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B625_9ARCH
peptidase M20
Peptidase M20 {ECO:0000313|EMBL:AFS80607.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus koreensis AR1.;"
PLM3-1_170_b1_sep16_scaffold_32313_2

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comp(361..528)
DNA (168bp) protein (56aa)
DoxX family protein Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B3E6_9ARCH
DoxX family protein {ECO:0000313|EMBL:AIE91698.1}; species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote AD1000_14_H02.;"
DoxX family protein
PLM3-1_170_b1_sep16_scaffold_32313_3
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(467..733)
DNA (267bp) protein (89aa)
DoxX family protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
doxX; DoxX protein
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b1_sep16_scaffold_32313_4

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829..1416
DNA (588bp) protein (196aa)
Proteasome subunit beta {ECO:0000256|HAMAP-Rule:MF_02113}; EC=3.4.25.1 {ECO:0000256|HAMAP-Rule:MF_02113};; 20S proteasome beta subunit {ECO:0000256|HAMAP-Rule:MF_02113}; Proteasome core protein PsmB {ECO:0000256|HAMAP-Rule:MF_02113}; species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_11_F08.;"
Proteasome subunit beta 1 Tax=Thaumarchaeota archaeon N4 RepID=V6ARZ9_9ARCH
putative proteasome endopeptidase complex, beta subunit
PLM3-1_170_b1_sep16_scaffold_32313_5
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(1413..1658)
DNA (246bp) protein (82aa)
PUA domain-containing protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
PUA domain-containing protein
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b1_sep16_scaffold_32313_6

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comp(1793..2041)
DNA (249bp) protein (83aa)
Transcriptional regulator, AsnC family Tax=Candidatus Nitrosopumilus salaria BD31 RepID=I3D328_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:KKK88361.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
AsnC family transcriptional regulator
PLM3-1_170_b1_sep16_scaffold_32313_7
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(2063..3091)
DNA (1029bp) protein (343aa)
homoserine dehydrogenase (EC:1.1.1.3)
homoserine dehydrogenase bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b1_sep16_scaffold_32313_8
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(3147..3548)
DNA (402bp) protein (134aa)
methionine-R-sulfoxide reductase (EC:1.8.4.12); K07305 peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
msrB; methionine sulfoxide reductase B (EC:1.8.4.11)
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b1_sep16_scaffold_32313_9

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comp(3575..3931)
DNA (357bp) protein (119aa)
Thymidylate synthase protein {ECO:0000313|EMBL:KFM22251.1}; EC=2.1.1.148 {ECO:0000313|EMBL:KFM22251.1};; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Marine Group I.;" source="Marine Group I thaumarchaeote SCGC AAA799-B03.;"
Thymidylate synthase complementing protein ThyX Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B3E9_9ARCH
thymidylate synthase complementing protein ThyX
Displaying 9 items

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