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PLM3-1_170_b1_sep16_scaffold_9022

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_170_b1_sep16_scaffold_9022_1
unknown

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comp(245..490)
DNA (246bp) protein (82aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_9022_2
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(545..691)
DNA (147bp) protein (49aa)
Uncharacterized protein bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b1_sep16_scaffold_9022_3
unknown

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comp(782..994)
DNA (213bp) protein (71aa)

This feature has no annotations

PLM3-1_170_b1_sep16_scaffold_9022_4
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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1122..1460
DNA (339bp) protein (113aa)
GTP diphosphokinase domain protein Tax=Candidatus Nitrosoarchaeum RepID=S2EUY2_9ARCH
GTP diphosphokinase domain protein {ECO:0000313|EMBL:EPA06089.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum limnia BG20.;"
metal dependent phosphohydrolase
PLM3-1_170_b1_sep16_scaffold_9022_5

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comp(1535..2476)
DNA (942bp) protein (314aa)
protoheme IX farnesyltransferase; K02301 protoheme IX farnesyltransferase [EC:2.5.1.-] bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
cyoE; protoheme IX farnesyltransferase (EC:2.5.1.-)
Uncharacterized protein {ECO:0000313|EMBL:KKK90692.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PLM3-1_170_b1_sep16_scaffold_9022_6
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(2516..2971)
DNA (456bp) protein (152aa)
transcriptional regulator; K03718 Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
putative HTH-type transcriptional regulator LrpA
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b1_sep16_scaffold_9022_7
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(3043..4122)
DNA (1080bp) protein (360aa)
aspartate-semialdehyde dehydrogenase (EC:1.2.1.11)
aspartate-semialdehyde dehydrogenase bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b1_sep16_scaffold_9022_8

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4210..4875
DNA (666bp) protein (222aa)
Aminotransferase class I and II (CobD) {ECO:0000313|EMBL:AIF11021.1}; EC=4.1.1.81 {ECO:0000313|EMBL:AIF11021.1};; species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_47_G11.;"
hypothetical protein Tax=cellular organisms RepID=UPI00036A3A48
class I/II aminotransferase
PLM3-1_170_b1_sep16_scaffold_9022_9
Candidatus Nitrosoarchaeum koreensis, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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5192..6031
DNA (840bp) protein (280aa)
Probable cobyric acid synthase Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CYQ8_9ARCH
Probable cobyric acid synthase {ECO:0000256|HAMAP-Rule:MF_00028}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum koreensis MY1.;"
cobyrinic acid ac-diamide synthase
PLM3-1_170_b1_sep16_scaffold_9022_10
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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6028..7002
DNA (975bp) protein (325aa)
Probable cobalamin biosynthesis protein CobD Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2ET38_9ARCH
Probable cobalamin biosynthesis protein CobD {ECO:0000256|HAMAP-Rule:MF_00024}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum limnia BG20.;"
cobD; putative cobalamin biosynthesis protein CobD
PLM3-1_170_b1_sep16_scaffold_9022_11
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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6995..7720
DNA (726bp) protein (242aa)
cobalamin 5'-phosphate synthase; K02233 adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26] bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
cobalamin 5'-phosphate synthase
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b1_sep16_scaffold_9022_12
Candidatus Nitrosopumilus sp. NF5, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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7717..8298
DNA (582bp) protein (194aa)
5-deoxyadenosylcobinamide phosphate nucleotidyltransferase Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A5Z9_NITMS
5-deoxyadenosylcobinamide phosphate nucleotidyltransferase
5-deoxyadenosylcobinamide phosphate nucleotidyltransferase {ECO:0000313|EMBL:AJW70009.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. NF5.;"
PLM3-1_170_b1_sep16_scaffold_9022_13
uncultured marine crenarchaeote HF4000_APKG8D6, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(8299..8496)
DNA (198bp) protein (66aa)
30S ribosomal protein S27e Tax=uncultured marine crenarchaeote HF4000_APKG8D6 RepID=B3TA46_9ARCH
30S ribosomal protein S27e {ECO:0000256|HAMAP-Rule:MF_00371}; species="Archaea; Thaumarchaeota; Nitrosopumilales; environmental samples.;" source="uncultured marine crenarchaeote HF4000_APKG8D6.;"
30S ribosomal protein S27E
PLM3-1_170_b1_sep16_scaffold_9022_14
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(8493..8774)
DNA (282bp) protein (94aa)
rpl44e; 50S ribosomal protein L44e bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
rpl44e; 50S ribosomal protein L44e
Tax=CSP1_1_Thaumarchaeota
PLM3-1_170_b1_sep16_scaffold_9022_15
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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8897..9637
DNA (741bp) protein (247aa)
adenine deaminase bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
adenine deaminase
Tax=CSP1_1_Thaumarchaeota
Displaying 15 items

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